RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
TPM1-230ENST00000561266 MPGP29372 298 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 AQP2P41181 271 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 RUNX1T1Q06455 604 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 CAMK2DQ13557 499 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 MELKQ14680 651 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 TRAM2Q15035 370 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 SEC23BQ15437 767 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 HIKESHIQ53FT3 197 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 PODNL1Q6PEZ8 512 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 PXKQ7Z7A4 578 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 CDH24Q86UP0 819 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 NRMQ8IXM6 262 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 POMGNT2Q8NAT1 580 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 OR52N5Q8NH56 324 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 LIPHQ8WWY8 451 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 HSD17B8Q92506 261 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 NSMCE2Q96MF7 247 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 HS6ST2Q96MM7 605 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 TMEM204Q9BSN7 226 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 RCE1Q9Y256 329 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 MED31Q9Y3C7 131 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 PLCE1Q9P212 2302 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 TRBV4-1A0A0J9YWV2 114 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 ZNF503-AS2A6NEH8 195 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 BLOC1S5-TXNDC5H3BN57 136 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 IGF2P01344 180 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 UMPSP11172 480 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 MNAT1P51948 309 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 IST1P53990 364 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 BIDP55957 195 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
TPM1-230ENST00000561266 PRKCDQ05655 676 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 PPA1Q15181 289 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 BEX5Q5H9J7 111 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 NCMAPQ5T1S8 102 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 FBXW10Q5XX13 1052 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 SLC35D2Q76EJ3 337 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 C20orf196Q8IYI0 205 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 OR1K1Q8NGR3 316 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 SLC7A13Q8TCU3 470 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 BCL2L2Q92843 193 aaPredicted RBP12.18□□□□□ -0.46
TPM1-230ENST00000561266 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 SAMD4AQ9UPU9 718 aaKnown RBP12.18□□□□□ -0.46
TPM1-230ENST00000561266 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
TPM1-230ENST00000561266 RTTNQ86VV8 2226 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 TRAV27A0A087WT01 109 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 A0A096LPE4 126 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 A0A1W2PPZ6 126 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 RPL36A-HNRNPH2H7BZ11 118 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 M0R3G1 203 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 ACOT8O14734 319 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 SLC43A1O75387 559 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 SEC14L2O76054 403 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 RHCEP18577 417 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 GPR4P46093 362 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 TUBA1BP68363 451 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 TUBA4AP68366 448 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 ARF1P84077 181 aaKnown RBP12.17□□□□□ -0.46
TPM1-230ENST00000561266 BSPH1Q075Z2 132 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 SPOCK1Q08629 439 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 CEACAM16Q2WEN9 425 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 TUBA1AQ71U36 451 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 NANOGNBQ7Z5D8 188 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 OR52J3Q8NH60 311 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 ACOT11Q8WXI4 607 aaPredicted RBP12.17□□□□□ -0.46
TPM1-230ENST00000561266 BPIFA2Q96DR5 249 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 TNFRSF13CQ96RJ3 184 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 GPA33Q99795 319 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 C1orf21Q9H246 121 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 CCM2LQ9NUG4 571 aaPredicted RBP12.17□□□□□ -0.46
TPM1-230ENST00000561266 ACTR3BQ9P1U1 418 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 ST6GALNAC2Q9UJ37 374 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
TPM1-230ENST00000561266 ZNF587BE7ETH6 402 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 RNF13O43567 381 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 KRT33AO76009 404 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 OR6A2O95222 327 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 GOSR1O95249 250 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 ATE1O95260 518 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 HIST1H2ABP04908 130 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 H1F0P07305 194 aaKnown RBP12.16□□□□□ -0.46
TPM1-230ENST00000561266 OMPP47874 163 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 ZNF83P51522 516 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 TRIM25Q14258 630 aaKnown RBP12.16□□□□□ -0.46
TPM1-230ENST00000561266 TBRG1Q3YBR2 411 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 SPATS1Q496A3 300 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 LCN8Q6JVE9 175 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 PGM2L1Q6PCE3 622 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 LRFN4Q6PJG9 635 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 PAMR1Q6UXH9 720 aa12.16□□□□□ -0.46
TPM1-230ENST00000561266 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms