RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 VKORC1L1Q8N0U8 176 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 LSMEM2Q8N112 164 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MREGQ8N565 214 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CLEC18CQ8NCF0 446 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ZNF738Q8NE65 137 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 NOXO1Q8NFA2 376 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR8J2Q8NGG1 315 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR10V1Q8NGI7 309 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR10G8Q8NGN5 311 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR4C3Q8NH37 302 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR5K2Q8NHB8 316 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 C16orf52Q8NHV5 167 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ZNF461Q8TAF7 563 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 NUBPLQ8TB37 319 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ITFG1Q8TB96 612 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 FAM110BQ8TC76 370 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 DOK4Q8TEW6 326 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 DNAJB3Q8WWF6 145 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 DYRK2Q92630 601 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 ESR2Q92731 530 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MYDGFQ969H8 173 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 EEF1AKMT3Q96AZ1 226 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CCDC127Q96BQ5 260 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RCN3Q96D15 328 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CMTM5Q96DZ9 223 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RAB3CQ96E17 227 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 POM121L2Q96KW2 1035 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 RCHY1Q96PM5 261 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TSSK3Q96PN8 268 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR8B4Q96RC9 309 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MCCC1Q96RQ3 725 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 SORT1Q99523 831 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 APOL2Q9BQE5 337 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CCDC28BQ9BUN5 200 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 QTRT1Q9BXR0 403 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 ACTR6Q9GZN1 396 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PRSS22Q9GZN4 317 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HOXD1Q9GZZ0 328 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 NAA50Q9GZZ1 169 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 WDR13Q9H1Z4 485 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OR51V1Q9H2C8 321 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HIPK2Q9H2X6 1198 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PPDPFQ9H3Y8 114 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 DSN1Q9H410 356 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IKZF5Q9H5V7 419 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TRIM45Q9H8W5 580 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 WDR41Q9HAD4 459 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 PATZ1Q9HBE1 687 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 ADGRL4Q9HBW9 690 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TMBIM4Q9HC24 238 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CD209Q9NNX6 404 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 FGF20Q9NP95 211 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 EXOSC3Q9NQT5 275 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 SIRT7Q9NRC8 400 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 NECAP2Q9NVZ3 263 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 C1orf109Q9NX04 203 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 SDHAF2Q9NX18 166 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 VAPAQ9P0L0 249 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 C11orf21Q9P2W6 132 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 B4GALT7Q9UBV7 327 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 LGALS13Q9UHV8 139 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MRM2Q9UI43 246 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 NAGKQ9UJ70 344 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 C3orf18Q9UK00 162 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 NXT1Q9UKK6 140 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 TCF19Q9Y242 345 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 V9GYQ6 96 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 USP6P35125 1406 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 NEDD4P46934 1319 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ADGRA3Q8IWK6 1321 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF521Q96K83 1311 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 USP42Q9H9J4 1324 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 STK36Q9NRP7 1315 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 A0A1W2PPV9 198 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 A0A1W2PRG6 482 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PRSS37A4D1T9 235 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PSMB11A5LHX3 300 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SLC22A20A6NK97 555 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SRRM4A7MD48 611 aaKnown RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 VGLL3A8MV65 326 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZNF99A8MXY4 864 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 E5RJQ4 531 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 E9PLD3 99 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 F8VP50 259 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 hCG_2039718K7EN88 272 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 M0R036 132 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 PDHXO00330 501 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SLC9A3R1O14745 358 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 SLC16A4O15374 487 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 HDAC3O15379 428 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TOX3O15405 576 aaPredicted RBP1.74□□□□□ -2.13
RTF1-207ENST00000561076 AQP9O43315 295 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 TRAPPC3O43617 180 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SNAI2O43623 268 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 SSNA1O43805 119 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RAMP2O60895 175 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 FKBP6O75344 327 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 ZMPSTE24O75844 475 aa1.74□□□□□ -2.13
RTF1-207ENST00000561076 RCBTB2O95199 551 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms