RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 MED29Q9NX70 200 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 FAM32AQ9Y421 112 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 TRBV4-1A0A0J9YWV2 114 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 OR6C65A6NJZ3 312 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 C11orf98E9PRG8 122 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 AKAP8O43823 692 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 UPK3AO75631 287 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 HRGP04196 525 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 AHCYP23526 432 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 LOXP28300 417 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 MPGP29372 298 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 IL1RL1Q01638 556 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 RPL18Q07020 188 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 TRAP1Q12931 704 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 SEC23BQ15437 767 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 TAB1Q15750 504 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 GABRA6Q16445 453 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 FGD3Q5JSP0 725 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 PODNL1Q6PEZ8 512 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 TBPL2Q6SJ96 375 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 ZNF730Q6ZMV8 503 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 ZDHHC21Q8IVQ6 265 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 MCUR1Q96AQ8 359 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 ZC3HAV1LQ96H79 300 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 TXNDC15Q96J42 360 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 EMC6Q9BV81 110 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 CADM1Q9BY67 442 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 MAGIXQ9H6Y5 334 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 ZNF226Q9NYT6 803 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 ST6GALNAC2Q9UJ37 374 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 FREM1Q5H8C1 2179 aa13.63□□□□□ -0.23
RABGGTA-219ENST00000560871 A0A1W2PPR1 153 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 SLC35F4A4IF30 521 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 RPL36A-HNRNPH2H7BZ11 118 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 CDC42EP2O14613 210 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 GSC2O15499 205 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 RNF13O43567 381 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 SLC43A1O75387 559 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 RAD51DO75771 328 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 SERPINI2O75830 405 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 OR6A2O95222 327 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 LIMS1P48059 325 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 ART1P52961 327 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 SPIBQ01892 262 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 FHL1Q13642 323 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 PHYHD1Q5SRE7 291 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 TMPRSS11FQ6ZWK6 438 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 MEX3DQ86XN8 651 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 C1orf162Q8NEQ5 155 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 MOSPD2Q8NHP6 518 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 BOD1Q96IK1 185 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 MUS81Q96NY9 551 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 ZNF347Q96SE7 839 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 SEPHS2Q99611 448 aa13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-219ENST00000560871 NPIPB13A6NJU9 1138 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 AQP12BA6NM10 295 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 NPIPB4C9JG80 1138 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 CASKO14936 926 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 KLF4O43474 513 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 ATP5HO75947 161 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 HIST1H2ABP04908 130 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 IFNGR1P15260 489 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 RRM2P31350 389 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 AQP2P41181 271 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 GPR4P46093 362 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 OMPP47874 163 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 SLC9A3P48764 834 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 MELKQ14680 651 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 TIMM23BQ5SRD1 257 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 C9orf135Q5VTT2 229 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 SLC35D2Q76EJ3 337 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 HIST3H2AQ7L7L0 130 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 ABHD12BQ7Z5M8 362 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 AQP12AQ8IXF9 295 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 C20orf196Q8IYI0 205 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 ADGRG5Q8IZF4 528 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 LRRC75AQ8NAA5 344 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 HIST1H2ACQ93077 130 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 POP5Q969H6 163 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 FOXC2Q99958 501 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 LRMDAQ9H2I8 198 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 NELFAQ9H3P2 528 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 CCM2LQ9NUG4 571 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 POMPQ9Y244 141 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 TMEM5Q9Y2B1 443 aa13.61□□□□□ -0.23
RABGGTA-219ENST00000560871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 CIB4A0PJX0 185 aa13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 SH3PXD2BA1X283 911 aa13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 EFCAB9A8MZ26 197 aa13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 CLOCKO15516 846 aa13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 GADD45GO95257 159 aa13.6□□□□□ -0.23
RABGGTA-219ENST00000560871 IGHMP01871 453 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms