RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 BARHL1Q9BZE3 327 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 MAN2B1O00754 1011 aa12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 LGI3Q8N145 548 aa12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 GNPNAT1Q96EK6 184 aaPredicted RBP12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 HRH3Q9Y5N1 445 aa12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 PTPRUQ92729 1446 aa12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 MN1Q10571 1320 aaPredicted RBP12.9□□□□□ -0.35
CSPG4P12-202ENST00000559989 FAM24AA6NFZ4 105 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 IGLON5A6NGN9 336 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 VNN1O95497 513 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 COMMD6Q7Z4G1 85 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 TMEM139Q8IV31 216 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 E9PCH4 1651 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 TMX2-CTNND1H3BSU7 103 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 SIM1P81133 766 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 SLC22A24Q8N4F4 322 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 CABLES2Q9BTV7 478 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 SPACA1Q9HBV2 294 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 CRLF2Q9HC73 371 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ATP13A2Q9NQ11 1180 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 PTGDR2Q9Y5Y4 395 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 AGLP35573 1532 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 A6NIN4 97 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 RNF225M0QZC1 329 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 FBP1P09467 338 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ACSM4P0C7M7 580 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 MPGP29372 298 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 GDNFP39905 211 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 SLC25A21Q9BQT8 299 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 RAB22AQ9UL26 194 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 TECPR2O15040 1411 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF91Q05481 1191 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 HAGHQ16775 308 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 TSEN54Q7Z6J9 526 aaKnown RBP12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF561Q8N587 486 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR10X1Q8NGY0 326 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 STACQ99469 402 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 CACFD1Q9UGQ2 172 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 M0QZ24 198 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 DEGS1O15121 323 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 FABP7O15540 132 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF85Q03923 595 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 OLIG2Q13516 323 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 MBTPS1Q14703 1052 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ETFDHQ16134 617 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 CPZQ66K79 652 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 NAGSQ8N159 534 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 NKAIN3Q8N8D7 197 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 DOK4Q8TEW6 326 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 CCDC88CQ9P219 2028 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 TRBV11-1A0A0K0K1C0 115 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF727A8MUV8 499 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 NME2P1O60361 137 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 S1PR4O95977 384 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ENTPD8Q5MY95 495 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 RPUSD3Q6P087 351 aaKnown RBP12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 GRAMD2AQ8IUY3 354 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 COMMD1Q8N668 190 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 GSX1Q9H4S2 264 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P12-202ENST00000559989 TRAV27A0A087WT01 109 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 A0A0D9SEW6 157 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 ARPC3O15145 178 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 ADRA2CP18825 462 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 PPP2CBP62714 309 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 ST8SIA2Q92186 375 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 ESRP2Q9H6T0 727 aaKnown RBP12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 ACRP10323 421 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 IAH1Q2TAA2 248 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 PRSS35Q8N3Z0 413 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 MOKQ9UQ07 419 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 GLAP06280 429 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 TBC1D28Q2M2D7 210 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 HSD17B8Q92506 261 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 GPRIN2O60269 458 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 CSF3P09919 207 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 NHLH1Q02575 133 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 NHLH2Q02577 135 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 DGAT2L6Q6ZPD8 337 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 DTWD2Q8NBA8 298 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 BET1LQ9NYM9 111 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 EMC9Q9Y3B6 208 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 TMEM221A6NGB7 291 aa12.88□□□□□ -0.35
CSPG4P12-202ENST00000559989 SMPD1P17405 629 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 315.6 ms