RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ATP6V1G2O95670 118 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 BCL10O95999 233 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 CRHP06850 196 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 IGFBP5P24593 272 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 SLC6A6P31641 620 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 SMSP52788 366 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 RPS4XP62701 263 aaKnown RBP12.75□□□□□ -0.37
SMAD6-204ENST00000559931 ERVK-25P63136 954 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 TOP3AQ13472 1001 aaPredicted RBP12.75□□□□□ -0.37
SMAD6-204ENST00000559931 RIPK1Q13546 671 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 FHL1Q13642 323 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 DAG1Q14118 895 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 POU4F3Q15319 338 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 LPCAT4Q643R3 524 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 CD300LDQ6UXZ3 194 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF620Q6ZNG0 422 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 FAM214BQ7L5A3 538 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 KIF18BQ86Y91 864 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 EPHX4Q8IUS5 362 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 TEX47Q8TBZ9 253 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 TXNDC15Q96J42 360 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF385AQ96PM9 386 aaKnown RBP12.75□□□□□ -0.37
SMAD6-204ENST00000559931 EMC6Q9BV81 110 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 KATNB1Q9BVA0 655 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 POLDIP3Q9BY77 421 aaKnown RBP12.75□□□□□ -0.37
SMAD6-204ENST00000559931 ENKD1Q9H0I2 346 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 BCO1Q9HAY6 547 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 MED29Q9NX70 200 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 B3GAT1Q9P2W7 334 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 GRHPRQ9UBQ7 328 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 SLC5A6Q9Y289 635 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 CDH10Q9Y6N8 788 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 RELNP78509 3460 aa12.75□□□□□ -0.37
SMAD6-204ENST00000559931 TENM4Q6N022 2769 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 SOCS2O14508 198 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 MITFO75030 526 aaPredicted RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 SS18L1O75177 396 aaPredicted RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 SMNDC1O75940 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 KRT33AO76009 404 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 IGFBP1P08833 259 aaPredicted RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 OSMP13725 252 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 BMP5P22003 454 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 NOS3P29474 1203 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 AGTR1P30556 359 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 OPRM1P35372 400 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 DAP3P51398 398 aaKnown RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 ALDH3A2P51648 485 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 BIDP55957 195 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 SLC36A3Q495N2 470 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 CARD17Q5XLA6 110 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 KDM4DQ6B0I6 523 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 NIPAL3Q6P499 406 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 CASP12Q6UXS9 341 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 THSD4Q6ZMP0 1018 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 DPY19L2P2Q6ZN68 376 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 NUFIP2Q7Z417 695 aaKnown RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 GALNT4Q8N4A0 578 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 ZIC4Q8N9L1 334 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 NAXEQ8NCW5 288 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 CCDC120Q96HB5 630 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 ERMAPQ96PL5 475 aaPredicted RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 TSSK6Q9BXA6 273 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 TXNIPQ9H3M7 391 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 IL20Q9NYY1 176 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 ENOPH1Q9UHY7 261 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 ING1Q9UK53 422 aaPredicted RBP12.74□□□□□ -0.37
SMAD6-204ENST00000559931 PROCRQ9UNN8 238 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 RNF6Q9Y252 685 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 IER3IP1Q9Y5U9 82 aa12.74□□□□□ -0.37
SMAD6-204ENST00000559931 UBR5O95071 2799 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 SLC35F4A4IF30 521 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 DVL2O14641 736 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 TRAF3IP2O43734 574 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 PPP1R3DO95685 299 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 CD14P08571 375 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ZNF26P17031 533 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 CDH2P19022 906 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 PEX2P28328 305 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ACVR1BP36896 505 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 KIR2DL2P43627 348 aaPredicted RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 RPS6KA3P51812 740 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 RAD23AP54725 363 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 RPL27P61353 136 aaKnown RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 MELKQ14680 651 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ACKR1Q16570 336 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 VWA1Q6PCB0 445 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.73□□□□□ -0.37
SMAD6-204ENST00000559931 BTLAQ7Z6A9 289 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 UBE2J2Q8N2K1 259 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 CLDN22Q8N7P3 220 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 LRRC75AQ8NAA5 344 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 OR6K3Q8NGY3 331 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
SMAD6-204ENST00000559931 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms