RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 NSG1A0A0A6YYJ2 146 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 RGS5O15539 181 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 GMFGO60234 142 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 ZFAND5O76080 213 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SNX4O95219 450 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 BGLAPP02818 100 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SPI1P17947 270 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 RPS5P46782 204 aaKnown RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 C17orf67Q0P5P2 114 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 GPR139Q6DWJ6 353 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 LEG1Q6P5S2 330 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 VASH1Q7L8A9 365 aaPredicted RBP16.09■□□□□ 0.17
SNX1-208ENST00000559844 FAM122BQ7Z309 247 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SLC35F2Q8IXU6 374 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SYS1Q8N2H4 156 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 DUSP19Q8WTR2 217 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TTC9Q92623 222 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 C4orf36Q96KX1 117 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 IP6K3Q96PC2 410 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 KLHDC3Q9BQ90 382 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 HDHD5Q9BXW7 423 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 ZNF160Q9HCG1 818 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 QPCTLQ9NXS2 382 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 MOKQ9UQ07 419 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 TMED7Q9Y3B3 224 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 CMAHPQ9Y471 501 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 MED13Q9UHV7 2174 aa16.09■□□□□ 0.17
SNX1-208ENST00000559844 DOCK10Q96BY6 2186 aa16.08■□□□□ 0.17
SNX1-208ENST00000559844 CFAP47Q6ZTR5 3102 aa16.08■□□□□ 0.17
SNX1-208ENST00000559844 A0A1W2PQ72 361 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 OR6C68A6NDL8 312 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 J3QLW9 94 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 CASKO14936 926 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 LRRTM2O43300 516 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 PLPP2O43688 288 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 GLCEO94923 617 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 ZNF19P17023 458 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 TNFSF8P32971 234 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 TMED10P49755 219 aaKnown RBP16.08■□□□□ 0.16
SNX1-208ENST00000559844 HSF2Q03933 536 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 TLE3Q04726 772 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 RPL18Q07020 188 aaKnown RBP16.08■□□□□ 0.16
SNX1-208ENST00000559844 CDC20Q12834 499 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 VASNQ6EMK4 673 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 MAMDC2Q7Z304 686 aaPredicted RBP16.08■□□□□ 0.16
SNX1-208ENST00000559844 LSM14AQ8ND56 463 aaKnown RBP16.08■□□□□ 0.16
SNX1-208ENST00000559844 HGDQ93099 445 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 Q96M85 177 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 CCDC32Q9BV29 185 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 GRHPRQ9UBQ7 328 aa16.08■□□□□ 0.16
SNX1-208ENST00000559844 SLC35F4A4IF30 521 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 ANKUB1A6NFN9 424 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 MASP2O00187 686 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 SUSD5O60279 629 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 CLEC2LP0C7M8 214 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 PLEKHG7Q6ZR37 379 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 NEIL3Q8TAT5 605 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 STK35Q8TDR2 534 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 ABCB10Q9NRK6 738 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 PLEKHB1Q9UF11 243 aaPredicted RBP16.07■□□□□ 0.16
SNX1-208ENST00000559844 A8MVM7 634 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 HPP00738 406 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 FBXW4P57775 412 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 COL28A1Q2UY09 1125 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 BTBD16Q32M84 506 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 POMZP3Q6PJE2 187 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 SNX29P2Q8IUI4 249 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 LYSMD2Q8IV50 215 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 SLC22A8Q8TCC7 542 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 THAP4Q8WY91 577 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 ST8SIA1Q92185 356 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 IMMP1LQ96LU5 166 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 ZMIZ1Q9ULJ6 1067 aa16.07■□□□□ 0.16
SNX1-208ENST00000559844 TMEM8BA6NDV4 472 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 ADAM10O14672 748 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 TBX1O43435 398 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 TFP02787 698 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 CFL1P23528 166 aaKnown RBP16.06■□□□□ 0.16
SNX1-208ENST00000559844 CDKN2AP42771 156 aaKnown RBP16.06■□□□□ 0.16
SNX1-208ENST00000559844 OR12D2P58182 307 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 KRR1Q13601 381 aaKnown RBP16.06■□□□□ 0.16
SNX1-208ENST00000559844 FAM69AQ5T7M9 428 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 TMEM91Q6ZNR0 172 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 ADGRG3Q86Y34 549 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 SYT14Q8NB59 555 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 THAP3Q8WTV1 239 aaPredicted RBP16.06■□□□□ 0.16
SNX1-208ENST00000559844 RNF138Q8WVD3 245 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 TRAPPC4Q9Y296 219 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 SIRT4Q9Y6E7 314 aaPredicted RBP16.06■□□□□ 0.16
SNX1-208ENST00000559844 TMEM72A0PK05 275 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 CD8B2A6NJW9 211 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 TMEM200CA6NKL6 621 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 C17orf51A8MQB3 221 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 RENP00797 406 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 F13BP05160 661 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 CD8BP10966 210 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 MTNR1BP49286 362 aa16.06■□□□□ 0.16
SNX1-208ENST00000559844 GBX2P52951 348 aaPredicted RBP16.06■□□□□ 0.16
SNX1-208ENST00000559844 DBPQ10586 325 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms