RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TMEM99Q8N816 258 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 C1orf162Q8NEQ5 155 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 OR4A15Q8NGL6 344 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 TSPEARQ8WU66 669 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 OIT3Q8WWZ8 545 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 PROX1Q92786 737 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 TMEM45BQ96B21 275 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 TESCQ96BS2 214 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MSI2Q96DH6 328 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 CCDC115Q96NT0 180 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 PRPF18Q99633 342 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 ZNF184Q99676 751 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 EBF4Q9BQW3 602 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 SLC35A5Q9BS91 424 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 VCXQ9H320 206 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 ZNF385DQ9H6B1 395 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MEAF6Q9HAF1 191 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 EXD2Q9NVH0 621 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 SLC7A8Q9UHI5 535 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MOKQ9UQ07 419 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 TMED7Q9Y3B3 224 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 DSPPQ9NZW4 1301 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 AQP7P3A6NL99 342 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 BBIP1A8MTZ0 92 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 FTCDNL1E5RQL4 147 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 NR5A2O00482 541 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 LMX1BO60663 402 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 NPIPB7O75200 414 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 AKR7A3O95154 331 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 CPSF4O95639 269 aaKnown RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 IGLV1-44P01699 117 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 PRG2P13727 222 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 ANPEPP15144 967 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 FKBP2P26885 142 aaKnown RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 MPGP29372 298 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 CALCRP30988 508 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 IL2RGP31785 369 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 SLC1A3P43003 542 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 NR4A2P43354 598 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 POLR2HP52434 150 aaKnown RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 UFM1P61960 85 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 SLC35A1P78382 337 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 HGFACQ04756 655 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 BNIP2Q12982 314 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 MAD2L1Q13257 205 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 CEACAM7Q14002 265 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 SQLEQ14534 574 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 ADIPOQQ15848 244 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 ZSWIM7Q19AV6 140 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 FAM174BQ3ZCQ3 159 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 GPAT3Q53EU6 434 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 COQ5Q5HYK3 327 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 FAM120AOSQ5T036 256 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 MRPL2Q5T653 305 aaKnown RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 PAQR6Q6TCH4 344 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 HACD2Q6Y1H2 254 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 RNF130Q86XS8 419 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 EPHX4Q8IUS5 362 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 OR9K2Q8NGE7 335 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 OR1K1Q8NGR3 316 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 ZNF563Q8TA94 476 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 WDR60Q8WVS4 1066 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 BCL2L2Q92843 193 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 FBXO17Q96EF6 278 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 ZHX1-C8orf76Q96EF9 292 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 AURKBQ96GD4 344 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 ZNF570Q96NI8 536 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 FOXN4Q96NZ1 517 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 TRNT1Q96Q11 434 aaKnown RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 C19orf24Q9BVV8 132 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 BEX2Q9BXY8 128 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 DPY30Q9C005 99 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 S100A14Q9HCY8 104 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 RLIMQ9NVW2 624 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 CRNNQ9UBG3 495 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 BTNL2Q9UIR0 455 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 PCDHGB4Q9UN71 923 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 SLC9A8Q9Y2E8 581 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 AMDHD2Q9Y303 409 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 SPIN1Q9Y657 262 aaPredicted RBP5.03□□□□□ -1.6
USP3-215ENST00000559771 ATP23Q9Y6H3 246 aa5.03□□□□□ -1.6
USP3-215ENST00000559771 TMEM129A0AVI4 362 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 LRP5LA4QPB2 252 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CDHR4A6H8M9 788 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 MAGEA13PA6NCF6 341 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CCDC154A6NI56 674 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 E9PBE3 544 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 H0YJX3 145 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 SDHDO14521 159 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 CASQ2O14958 399 aaPredicted RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 EIF1BO60739 113 aaKnown RBP5.02□□□□□ -1.61
USP3-215ENST00000559771 FZD7O75084 574 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 UPK3AO75631 287 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 KRT36O76013 467 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 ZNF432O94892 652 aa5.02□□□□□ -1.61
USP3-215ENST00000559771 LGI1O95970 557 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms