RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TMBIM6P55061 237 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 CDH11P55287 796 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 HSF1Q00613 529 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 RAB40BQ12829 278 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 ITGADQ13349 1161 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 C1QL3Q5VWW1 255 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 VASNQ6EMK4 673 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 C3orf33Q6P1S2 294 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 GID4Q8IVV7 300 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 ALDH16A1Q8IZ83 802 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 C10orf53Q8N6V4 93 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 BBS1Q8NFJ9 593 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 MOSPD2Q8NHP6 518 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 ABTB1Q969K4 478 aaPredicted RBP14.83□□□□□ -0.04
TPM1-219ENST00000559397 RNFT2Q96EX2 444 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 TMEM185BQ9H7F4 350 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 COMMD3-BMI1R4GMX3 469 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 TRIM64BA6NI03 449 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 RIIAD1A6NNX1 92 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 TRMUO75648 421 aaKnown RBP14.82□□□□□ -0.04
TPM1-219ENST00000559397 PTHP01270 115 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 RPS5P46782 204 aaKnown RBP14.82□□□□□ -0.04
TPM1-219ENST00000559397 STARP49675 285 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.82□□□□□ -0.049e-6■■■■□ 24.9
TPM1-219ENST00000559397 C1orf140Q5VVS0 124 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 NIPAL3Q6P499 406 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 PLBD1Q6P4A8 553 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 FGD2Q7Z6J4 655 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 GGNQ86UU5 652 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 PTP4A1Q93096 173 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 NMD3Q96D46 503 aaKnown RBP14.82□□□□□ -0.04
TPM1-219ENST00000559397 YIPF6Q96EC8 236 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 ERMAPQ96PL5 475 aaPredicted RBP14.82□□□□□ -0.04
TPM1-219ENST00000559397 TIMP4Q99727 224 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 OR11A1Q9GZK7 315 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 EXO5Q9H790 373 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 TAS2R16Q9NYV7 291 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 IER3IP1Q9Y5U9 82 aa14.82□□□□□ -0.04
TPM1-219ENST00000559397 SPIN1Q9Y657 262 aaPredicted RBP14.82□□□□□ -0.04
TPM1-219ENST00000559397 A0A1B0GTH9 108 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 FAM183AA6NL82 134 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 M0R082 166 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 IFNGP01579 166 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 OPN1LWP04000 364 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 FKBP2P26885 142 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 PSMB9P28065 219 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 AQP2P41181 271 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 CLDN15P56746 228 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 CLDN18P56856 261 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 TMED1Q13445 227 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 CRMP1Q14194 572 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 BCL2A1Q16548 175 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 GXYLT1Q4G148 440 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 FAM69AQ5T7M9 428 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ZNF367Q7RTV3 350 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ANKRD13BQ86YJ7 626 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 GHDCQ8N2G8 530 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ATP6V1C2Q8NEY4 427 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 CPT1CQ8TCG5 803 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 SLC25A43Q8WUT9 341 aaPredicted RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 C12orf43Q96C57 262 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 DDOQ99489 341 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 FUNDC2Q9BWH2 189 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 YIPF3Q9GZM5 350 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 NAA50Q9GZZ1 169 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 H2AFY2Q9P0M6 372 aaPredicted RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 TNFRSF10DQ9UBN6 386 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 KLHL21Q9UJP4 597 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 EXOGQ9Y2C4 368 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 ZFYVE26Q68DK2 2539 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 PRR23D1E9PI22 279 aaPredicted RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 M0R3G1 203 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 IMPA2O14732 288 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ZNHIT1O43257 154 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 RAB36O95755 333 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 CD14P08571 375 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 PRR23D2P0DMB1 279 aaPredicted RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 ZNF708P17019 499 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ZNF3P17036 446 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 POU3F2P20265 443 aaPredicted RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 SLC2A5P22732 501 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 RPL4P36578 427 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 SUCLG1P53597 346 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 CLDN20P56880 219 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 B3GNT6Q6ZMB0 384 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 MEPCEQ7L2J0 689 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 FAM122BQ7Z309 247 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 IGFN1Q86VF2 1251 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 SLC37A3Q8NCC5 494 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 SMPDL3BQ92485 455 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 WDYHV1Q96HA8 205 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ADGRG7Q96K78 797 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 ARL5BQ96KC2 179 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 COG8Q96MW5 612 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 HCAR1Q9BXC0 346 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 PTTG2Q9NZH5 202 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 WARS2Q9UGM6 360 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 LSM2Q9Y333 95 aaKnown RBP14.81□□□□□ -0.04
TPM1-219ENST00000559397 ADAM18Q9Y3Q7 739 aa14.81□□□□□ -0.04
TPM1-219ENST00000559397 SHANK1Q9Y566 2161 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms