RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CD40P25942 277 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 NTF4P34130 210 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 GUCA1AP43080 201 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 CAPZA2P47755 286 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 GSK3BP49841 420 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 DAP3P51398 398 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF83P51522 516 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CRYBA2P53672 197 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 RPS4XP62701 263 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 NKX6-1P78426 367 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 FOXD4Q12950 439 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 TESK1Q15569 626 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF74Q16587 644 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SPATS1Q496A3 300 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF672Q499Z4 452 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 IFI44LQ53G44 452 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SAMD4BQ5PRF9 694 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 AGAP6Q5VW22 663 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CARD17Q5XLA6 110 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 GLYATQ6IB77 296 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ADAM5Q6NVV9 412 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ANKRD16Q6P6B7 361 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 LINC00114Q6XXX2 140 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF730Q6ZMV8 503 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 NANOGNBQ7Z5D8 188 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 PIGWQ7Z7B1 504 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 TREML1Q86YW5 311 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 RBM45Q8IUH3 476 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 RNF113BQ8IZP6 322 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 PGAM4Q8N0Y7 254 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 LRRC75A-AS1Q8N1F1 130 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF611Q8N823 705 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZIC4Q8N9L1 334 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 OR6N1Q8NGY5 312 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 OR6X1Q8NH79 312 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SMAP2Q8WU79 429 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 TMEM255BQ8WV15 326 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 TMEM239Q8WW34 195 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 NANOS1Q8WY41 292 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 POP5Q969H6 163 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF566Q969W8 418 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 MCUR1Q96AQ8 359 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SGTBQ96EQ0 304 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 BOD1Q96IK1 185 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 PRRC1Q96M27 445 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 MOGAT1Q96PD6 335 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CCT8L2Q96SF2 557 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 WFDC6Q9BQY6 131 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ZNF426Q9BUY5 554 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 EMC6Q9BV81 110 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 C1QTNF6Q9BXI9 259 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 RSPO3Q9BXY4 272 aaPredicted RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 ULBP2Q9BZM5 246 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 AMBRA1Q9C0C7 1298 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CXXC4Q9H2H0 198 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SLC17A5Q9NRA2 495 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CMTM6Q9NX76 183 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 CISD1Q9NZ45 108 aaKnown RBP3.84□□□□□ -1.79
SNX1-205ENST00000559339 B3GAT1Q9P2W7 334 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ABCD2Q9UBJ2 740 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SEC14L4Q9UDX3 406 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 MAGEL2Q9UJ55 1249 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 RIMS3Q9UJD0 308 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 LAMP3Q9UQV4 416 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 SLC25A15Q9Y619 301 aa3.84□□□□□ -1.79
SNX1-205ENST00000559339 ARPC4-TTLL3A0A0A6YYG9 625 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 A0A1W2PPR1 153 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 DPRXA6NFQ7 191 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FAM171A2A8MVW0 826 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 LRRN3E7EW58 273 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 MS4A18H0YCH9 400 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TRAF3IP2O43734 574 aaPredicted RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 OR7A10O76100 309 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ZNF432O94892 652 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FARS2O95363 451 aaKnown RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 PLAUP00749 431 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 IGHG1P01857 330 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 BGLAPP02818 100 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 THY1P04216 161 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ASAH2BP0C7U1 165 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CD79AP11912 226 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 HLA-DOBP13765 273 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 IFNGR1P15260 489 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FOSL1P15407 271 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 RHCEP18577 417 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 FUT1P19526 365 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 TNFRSF1BP20333 461 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CALB2P22676 271 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ARR3P36575 388 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 IFNGR2P38484 337 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 YAP1P46937 504 aaKnown RBP3.83□□□□□ -1.8
SNX1-205ENST00000559339 CSNK1A1P48729 337 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 MMP16P51512 607 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CDH11P55287 796 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 BIDP55957 195 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ATP5J2P56134 94 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CLRN1P58418 232 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 SMIM11AP58511 58 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 ADAM8P78325 824 aa3.83□□□□□ -1.8
SNX1-205ENST00000559339 CHRNB3Q05901 458 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms