RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 VRK1Q99986 396 aaPredicted RBP11.72□□□□□ -0.53
VPS18-203ENST00000558855 ARMC7Q9H6L4 198 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 PRDM4Q9UKN5 801 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 USP22Q9UPT9 525 aa11.72□□□□□ -0.53
VPS18-203ENST00000558855 LOC102725191A0A1B0GVB3 256 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 CPSF4LA6NMK7 179 aaKnown RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 SERPINI2O75830 405 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 PATE4P0C8F1 98 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 LYNX1P0DP58 116 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 CD247P20963 164 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 GZMMP51124 257 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 SH3BGRP55822 239 aaPredicted RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 SNRPD2P62316 118 aaKnown RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
VPS18-203ENST00000558855 IL1RL1Q01638 556 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 CAMK2DQ13557 499 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 C1DQ13901 141 aaKnown RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 EFNB3Q15768 340 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 CARTPTQ16568 116 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 C3orf36Q3SXR2 165 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 CHRFAM7AQ494W8 412 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 FAM91A1Q658Y4 838 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 ULK3Q6PHR2 472 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 SLC46A3Q7Z3Q1 461 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 DHDDSQ86SQ9 333 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 ARMC8Q8IUR7 673 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 GPR137CQ8N3F9 429 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 LRRC17Q8N6Y2 441 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 HIPK4Q8NE63 616 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 NUP37Q8NFH4 326 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 DNAJA4Q8WW22 397 aaPredicted RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 PROX1Q92786 737 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 TAMM41Q96BW9 452 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 SLC47A1Q96FL8 570 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 DOK1Q99704 481 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 CACYBPQ9HB71 228 aaKnown RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 MYEF2Q9P2K5 600 aaKnown RBP11.71□□□□□ -0.53
VPS18-203ENST00000558855 PMF1-BGLAPU3KQ54 211 aa11.71□□□□□ -0.53
VPS18-203ENST00000558855 STAB1Q9NY15 2570 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 LRP5LA4QPB2 252 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 RNF212BA8MTL3 300 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 ZNF99A8MXY4 864 aaPredicted RBP11.7□□□□□ -0.54
VPS18-203ENST00000558855 B9A039 149 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 C11orf98E9PRG8 122 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 hCG_2039718K7EN88 272 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 FBP2O00757 339 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 PLPP3O14495 311 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
VPS18-203ENST00000558855 OR2T1O43869 369 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 PDE5AO76074 875 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 B4GALT1P15291 398 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 ZNF14P17017 642 aaPredicted RBP11.7□□□□□ -0.54
VPS18-203ENST00000558855 TNFRSF1BP20333 461 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 PPIBP23284 216 aaKnown RBP11.7□□□□□ -0.54
VPS18-203ENST00000558855 PDLIM4P50479 330 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 PIGFQ07326 219 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 MELKQ14680 651 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 MFSD13AQ14CX5 517 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 C1QTNF12Q5T7M4 302 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 KRT80Q6KB66 452 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 KRT73Q86Y46 540 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 UEVLDQ8IX04 471 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 FAM169BQ8N8A8 192 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 PIK3C3Q8NEB9 887 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 SPATA3Q8NHX4 192 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
VPS18-203ENST00000558855 CKAP2Q8WWK9 683 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 KCNK17Q96T54 332 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 CGREF1Q99674 301 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 MCHR1Q99705 422 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 TPK1Q9H3S4 243 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 ZNF442Q9H7R0 627 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
VPS18-203ENST00000558855 MRPL39Q9NYK5 338 aaKnown RBP11.7□□□□□ -0.54
VPS18-203ENST00000558855 SH3PXD2BA1X283 911 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 M0QX08 132 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 CSF3P09919 207 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 FAM157CP0CG43 387 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 NQO1P15559 274 aaKnown RBP11.69□□□□□ -0.54
VPS18-203ENST00000558855 FUT4P22083 530 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 SLC6A2P23975 617 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 CAPZA2P47755 286 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 PPOXP50336 477 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 NCALDP61601 193 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 PUDPQ08623 228 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 PMS2P3Q13401 168 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 SNTB2Q13425 540 aaKnown RBP11.69□□□□□ -0.54
VPS18-203ENST00000558855 TRIP10Q15642 601 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 KRTAP24-1Q3LI83 254 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 ENTPD8Q5MY95 495 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 CYB5R2Q6BCY4 276 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 C5orf46Q6UWT4 87 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 SPATA21Q7Z572 469 aa11.69□□□□□ -0.54
VPS18-203ENST00000558855 NET1Q7Z628 596 aaPredicted RBP11.69□□□□□ -0.54
VPS18-203ENST00000558855 LRP11Q86VZ4 500 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms