RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PPA1Q15181 289 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 IQCCQ4KMZ1 466 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 HIKESHIQ53FT3 197 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 HIST3H2AQ7L7L0 130 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 NRMQ8IXM6 262 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 POMGNT2Q8NAT1 580 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 HIST1H2ACQ93077 130 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 HS6ST2Q96MM7 605 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 MUS81Q96NY9 551 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC19A3Q9BZV2 496 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 OR10A4Q9H209 315 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 NPAP1Q9NZP6 1156 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 MAGEL2Q9UJ55 1249 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 ZNF229Q9UJW7 825 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 SAMD4AQ9UPU9 718 aaKnown RBP12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 MED31Q9Y3C7 131 aa12.14□□□□□ -0.47
TSPAN3-205ENST00000558745 A0A096LPE4 126 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 A0A1W2PPZ6 126 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC43A1O75387 559 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 SEMG1P04279 462 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 MPGP29372 298 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 ZNF83P51522 516 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 BIDP55957 195 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 TUBA1BP68363 451 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 TUBA4AP68366 448 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 RPL18Q07020 188 aaKnown RBP12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 ZP4Q12836 540 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 BEX5Q5H9J7 111 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 TIMM23BQ5SRD1 257 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 PODNL1Q6PEZ8 512 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 TUBA1AQ71U36 451 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC35D2Q76EJ3 337 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 NANOGNBQ7Z5D8 188 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 PXKQ7Z7A4 578 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 PIK3C3Q8NEB9 887 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 OR52J3Q8NH60 311 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 NEUROG1Q92886 237 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 THTPAQ9BU02 230 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 GPR35Q9HC97 309 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 NOX1Q9Y5S8 564 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC25A15Q9Y619 301 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 CADP27708 2225 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 CCDC168Q8NDH2 2452 aa12.13□□□□□ -0.47
TSPAN3-205ENST00000558745 TRBV4-1A0A0J9YWV2 114 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 ZNF587BE7ETH6 402 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 SEC14L2O76054 403 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 IFNA8P32881 189 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 IST1P53990 364 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 ARF1P84077 181 aaKnown RBP12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 PRKCDQ05655 676 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 SEC23BQ15437 767 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 CEACAM16Q2WEN9 425 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 ZNF730Q6ZMV8 503 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 C20orf196Q8IYI0 205 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 OR51A7Q8NH64 312 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC7A13Q8TCU3 470 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC7A6OSQ96CW6 309 aaPredicted RBP12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 BPIFA2Q96DR5 249 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 TNFRSF13CQ96RJ3 184 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 SEPHS2Q99611 448 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 LINC00470Q9BZP3 86 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 UBTD1Q9HAC8 227 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 CRLF2Q9HC73 371 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 SLC17A5Q9NRA2 495 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 CCM2LQ9NUG4 571 aaPredicted RBP12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 RCE1Q9Y256 329 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 FBN3Q75N90 2809 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 HIVEP1P15822 2718 aa12.12□□□□□ -0.47
TSPAN3-205ENST00000558745 CLOCKO15516 846 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 H1F0P07305 194 aaKnown RBP12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 RHCEP18577 417 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 GPR4P46093 362 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 RUNX1T1Q06455 604 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 BSPH1Q075Z2 132 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 HMBOX1Q6NT76 420 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 CYP4Z1Q86W10 505 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 GPR137CQ8N3F9 429 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 ANKK1Q8NFD2 765 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 ACOT11Q8WXI4 607 aaPredicted RBP12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 POM121Q96HA1 1249 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 ACTR3BQ9P1U1 418 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 ST6GALNAC2Q9UJ37 374 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 MED13LQ71F56 2210 aa12.11□□□□□ -0.47
TSPAN3-205ENST00000558745 NAV3Q8IVL0 2385 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms