RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ZP4Q12836 540 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 ZNF730Q6ZMV8 503 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 SPATA24Q86W54 205 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 CDC20BQ86Y33 519 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 TMEM45BQ96B21 275 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 BPIFA2Q96DR5 249 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 TXNDC15Q96J42 360 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 ZNF347Q96SE7 839 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 GPA33Q99795 319 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 CHID1Q9BWS9 393 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 ASPNQ9BXN1 380 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 TRIM15Q9C019 465 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 FANCFQ9NPI8 374 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 NANSQ9NR45 359 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 RASSF1Q9NS23 344 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 GALNT8Q9NY28 637 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 VNN3Q9NY84 501 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 EMC3Q9P0I2 261 aa13.7□□□□□ -0.22
LINC01220-201ENST00000558575 NOSIPQ9Y314 301 aaKnown RBP13.7□□□□□ -0.22
LINC01220-201ENST00000558575 DHRS12A0PJE2 317 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 SH3PXD2BA1X283 911 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 TRAF3IP2O43734 574 aaPredicted RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 ZNF432O94892 652 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 GADD45GO95257 159 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 RAP2AP10114 183 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 UMPSP11172 480 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 GTF2E2P29084 291 aaKnown RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 RRM2P31350 389 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 UQCRC1P31930 480 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 OMPP47874 163 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 SPIBQ01892 262 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 PPP1R8Q12972 351 aaKnown RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 CCNIQ14094 377 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 LAPTM4AQ15012 233 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 DEFB113Q30KQ7 82 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 FAM98BQ52LJ0 330 aaKnown RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 TMPRSS11FQ6ZWK6 438 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 GABRG1Q8N1C3 465 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 PAPD5Q8NDF8 572 aaKnown RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 OR4C15Q8NGM1 316 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 MOSPD2Q8NHP6 518 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 POP5Q969H6 163 aaKnown RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 C6orf203Q9P0P8 240 aaPredicted RBP13.69□□□□□ -0.22
LINC01220-201ENST00000558575 AURKCQ9UQB9 309 aa13.69□□□□□ -0.22
LINC01220-201ENST00000558575 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 CDC42EP2O14613 210 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 MRPL33O75394 65 aaKnown RBP13.68□□□□□ -0.22
LINC01220-201ENST00000558575 ATE1O95260 518 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 STAMBPO95630 424 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 IGHV3-9P01782 118 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 ADORA3P0DMS8 318 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 NQO1P15559 274 aaKnown RBP13.68□□□□□ -0.22
LINC01220-201ENST00000558575 ZNF26P17031 533 aaPredicted RBP13.68□□□□□ -0.22
LINC01220-201ENST00000558575 ZNF43P17038 809 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 CD79BP40259 229 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 AQP2P41181 271 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 PCYT1AP49585 367 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 SELENOPP49908 381 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 FOXG1P55316 489 aaPredicted RBP13.68□□□□□ -0.22
LINC01220-201ENST00000558575 CLDN17P56750 224 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 PUDPQ08623 228 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 EXOC3L2Q2M3D2 409 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 TSPO2Q5TGU0 170 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 C22orf34Q6ZV56 151 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 AAED1Q7RTV5 226 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 PXKQ7Z7A4 578 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 ZER1Q7Z7L7 766 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 OR4K5Q8NGD3 323 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 ELOVL5Q9NYP7 299 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 LYVE1Q9Y5Y7 322 aa13.68□□□□□ -0.22
LINC01220-201ENST00000558575 C11orf98E9PRG8 122 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 BLOC1S5-TXNDC5H3BN57 136 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 KLF4O43474 513 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 PTP4A3O75365 173 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 KRT36O76013 467 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 AHCYP23526 432 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 CCKARP32238 428 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 GPR4P46093 362 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 SMIM11AP58511 58 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 RPL18Q07020 188 aaKnown RBP13.67□□□□□ -0.22
LINC01220-201ENST00000558575 LGALS3BPQ08380 585 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 OR2T5Q6IEZ7 315 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 STAC2Q6ZMT1 411 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 BEND4Q6ZU67 534 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 ZNF100Q8IYN0 542 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 LRRC75AQ8NAA5 344 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 OR2T29Q8NH02 315 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 APH1AQ96BI3 265 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 FAM46AQ96IP4 442 aaKnown RBP13.67□□□□□ -0.22
LINC01220-201ENST00000558575 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 SLC7A10Q9NS82 523 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 PARPBPQ9NWS1 579 aa13.67□□□□□ -0.22
LINC01220-201ENST00000558575 MED29Q9NX70 200 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms