RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 MS4A7Q9GZW8 240 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 OR51I1Q9H343 314 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 TUBB1Q9H4B7 451 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 MTHFD2LQ9H903 347 aaPredicted RBP4.42□□□□□ -1.7
SPG11-208ENST00000558155 TNFRSF12AQ9NP84 129 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 B3GAT2Q9NPZ5 323 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 B3GNT2Q9NY97 397 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 SLCO1C1Q9NYB5 712 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 NKIRAS2Q9NYR9 191 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 TAAR3PQ9P1P4 343 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 ZDHHC2Q9UIJ5 367 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 MID2Q9UJV3 735 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 FBXL3Q9UKT7 428 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 RCE1Q9Y256 329 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 POFUT2Q9Y2G5 429 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 DNAJC15Q9Y5T4 150 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 DSPPQ9NZW4 1301 aa4.42□□□□□ -1.7
SPG11-208ENST00000558155 A0A096LPI6 279 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 IGHV1-69-2A0A0G2JMI3 117 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 RNF103-CHMP3A0A140T963 221 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 AGAP5A6NIR3 686 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 CLDN24A6NM45 220 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 PEX11AO75192 247 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 GLRA3O75311 464 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 PEX14O75381 377 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 NCR1O76036 304 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 RAB36O95755 333 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 HLA-HP01893 362 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 MT-ND5P03915 603 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 FGF4P08620 206 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 CPA3P15088 417 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 ZNF14P17017 642 aaPredicted RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 MDKP21741 143 aaPredicted RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 UQCRC2P22695 453 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 OMGP23515 440 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 GTF2E2P29084 291 aaKnown RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 CASQ1P31415 396 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 PTDSS1P48651 473 aaKnown RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 P2RY4P51582 365 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 RAB1AP62820 205 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 CCL8P80075 99 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 LCN2P80188 198 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 EPS8Q12929 822 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 BNIP2Q12982 314 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 CAMK2DQ13557 499 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 PTGR1Q14914 329 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 SLC9A3R2Q15599 337 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 FXNQ16595 210 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 ATP6AP1LQ52LC2 224 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 C1orf140Q5VVS0 124 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 IL23RQ5VWK5 629 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 WBP2NLQ6ICG8 309 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 C8orf74Q6P047 294 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 TNFAIP8L2Q6P589 184 aaPredicted RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 ZNF813Q6ZN06 617 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 FRRS1Q6ZNA5 592 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 ZCCHC23Q6ZST2 131 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 USP51Q70EK9 711 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 SPATC1Q76KD6 591 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 WDFY1Q8IWB7 410 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 BCL6BQ8N143 479 aaPredicted RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 CLEC4FQ8N1N0 589 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 KDM8Q8N371 416 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 CADM2Q8N3J6 435 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 KIR3DL3Q8N743 410 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 OR4F5Q8NH21 305 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 MFSD8Q8NHS3 518 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 KIF18AQ8NI77 898 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 SYNPRQ8TBG9 265 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 STK35Q8TDR2 534 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 IFT81Q8WYA0 676 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 C11orf40Q8WZ69 217 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 CCL17Q92583 94 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 ELMOD3Q96FG2 381 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 GAL3ST1Q99999 423 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 MRI1Q9BV20 369 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.41□□□□□ -1.7
SPG11-208ENST00000558155 PDP1Q9P0J1 537 aaPredicted RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 MYEF2Q9P2K5 600 aaKnown RBP4.41□□□□□ -1.7
SPG11-208ENST00000558155 ZNF69Q9UC07 566 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 SLC7A8Q9UHI5 535 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 FZR1Q9UM11 496 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 WIPI2Q9Y4P8 454 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 AUP1Q9Y679 476 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 WNK1Q9H4A3 2382 aa4.41□□□□□ -1.7
SPG11-208ENST00000558155 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 LOC102725191A0A1B0GVB3 256 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 PRSS51A0A1B0GVH4 220 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 ISPDA4D126 451 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 ZNF503-AS2A6NEH8 195 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 ZNF726A6NNF4 738 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 M0R3G1 203 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 RNASET2O00584 256 aaKnown RBP4.4□□□□□ -1.71
SPG11-208ENST00000558155 AIM2O14862 343 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 TRAF3IP2O43734 574 aaPredicted RBP4.4□□□□□ -1.71
SPG11-208ENST00000558155 OR2T1O43869 369 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 TRIM13O60858 407 aa4.4□□□□□ -1.71
SPG11-208ENST00000558155 ENTPD5O75356 428 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms