RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CDK20Q8IZL9 346 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 ANKK1Q8NFD2 765 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 POP5Q969H6 163 aaKnown RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 UTP4Q969X6 686 aaKnown RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 RSRC1Q96IZ7 334 aaKnown RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 WFIKKN1Q96NZ8 548 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 OR2M2Q96R28 347 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 TNFRSF13CQ96RJ3 184 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 ACTR6Q9GZN1 396 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.38
USP3-205ENST00000557884 ASB6Q9NWX5 421 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 VNN3Q9NY84 501 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 RCE1Q9Y256 329 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 TMEM5Q9Y2B1 443 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 GPR52Q9Y2T5 361 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 LYVE1Q9Y5Y7 322 aa12.65□□□□□ -0.38
USP3-205ENST00000557884 FBN2P35556 2912 aa12.65□□□□□ -0.39
USP3-205ENST00000557884 TACC2O95359 2948 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 HTR3EA5X5Y0 456 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 ZNF726A6NNF4 738 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 TNFRSF11BO00300 401 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 CLOCKO15516 846 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 OR10H3O60404 316 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 UPK3AO75631 287 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 CNOT4O95628 575 aaKnown RBP12.64□□□□□ -0.39
USP3-205ENST00000557884 COX5AP20674 150 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 PEX19P40855 299 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 OMPP47874 163 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 PCYT1AP49585 367 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 BIDP55957 195 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 ITGADQ13349 1161 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 CAMK2DQ13557 499 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 STK11Q15831 433 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 OR2T5Q6IEZ7 315 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 OAFQ86UD1 273 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 IGFN1Q86VF2 1251 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 ZNF295-AS1Q8N0V1 137 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 TMEM123Q8N131 208 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 ZNF433Q8N7K0 673 aaPredicted RBP12.64□□□□□ -0.39
USP3-205ENST00000557884 POMGNT2Q8NAT1 580 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 OR2T29Q8NH02 315 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 FAM222BQ8WU58 562 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 GPA33Q99795 319 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 INIPQ9NRY2 104 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 MALT1Q9UDY8 824 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 SAMHD1Q9Y3Z3 626 aaKnown RBP12.64□□□□□ -0.39
USP3-205ENST00000557884 U3KQV3 271 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 MPDZO75970 2070 aa12.64□□□□□ -0.39
USP3-205ENST00000557884 A0A1W2PRG6 482 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 CIB4A0PJX0 185 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 ZNF587BE7ETH6 402 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 RAD51DO75771 328 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 KRT36O76013 467 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 ITGA5P08648 1049 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 EPXP11678 715 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 PRF1P14222 555 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 CDH2P19022 906 aaPredicted RBP12.63□□□□□ -0.39
USP3-205ENST00000557884 LIMS1P48059 325 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 SLC9A3P48764 834 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 RPS4XP62701 263 aaKnown RBP12.63□□□□□ -0.39
USP3-205ENST00000557884 TOP3AQ13472 1001 aaPredicted RBP12.63□□□□□ -0.39
USP3-205ENST00000557884 CCNIQ14094 377 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 ALG10Q5BKT4 473 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 LINGO2Q7L985 606 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 ZER1Q7Z7L7 766 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 GPR137CQ8N3F9 429 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 OR9Q2Q8NGE9 314 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 OR4C15Q8NGM1 316 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 SLCO4A1Q96BD0 722 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 DACH2Q96NX9 599 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 HDHD5Q9BXW7 423 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 REEP1Q9H902 201 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 MCCC2Q9HCC0 563 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 KRCC1Q9NPI7 259 aaPredicted RBP12.63□□□□□ -0.39
USP3-205ENST00000557884 TAS2R16Q9NYV7 291 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 HIF3AQ9Y2N7 669 aa12.63□□□□□ -0.39
USP3-205ENST00000557884 UNC119BA6NIH7 251 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 MCIDASD6RGH6 385 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 M0R3G1 203 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 PDLIM1O00151 329 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 FKBP6O75344 327 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 BCL10O95999 233 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 CST1P01037 141 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 THBDP07204 575 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 TSPAN19P0C672 248 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 MPGP29372 298 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 CSNK1A1P48729 337 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 IST1P53990 364 aa12.62□□□□□ -0.39
USP3-205ENST00000557884 CTXN1P60606 82 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms