RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 NMNAT2Q9BZQ4 307 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 B3GNT4Q9C0J1 378 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 OR51E2Q9H255 320 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 KLHL1Q9NR64 748 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 H2AFY2Q9P0M6 372 aaPredicted RBP6.64□□□□□ -1.35
SPG11-204ENST00000557866 KLHL21Q9UJP4 597 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 VDAC3Q9Y277 283 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 ERGIC3Q9Y282 383 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 SLC6A5Q9Y345 797 aa6.64□□□□□ -1.35
SPG11-204ENST00000557866 EXOSC1Q9Y3B2 195 aaKnown RBP6.64□□□□□ -1.35
SPG11-204ENST00000557866 TEX13CA0A0J9YWL9 993 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 TMEM129A0AVI4 362 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SLC22A31A6NKX4 558 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 CDRT15L2A8MXV6 281 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 G3V3Y1 287 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 PLPP3O14495 311 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 TP53I11O14683 189 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 MYL12BO14950 172 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 LRRTM2O43300 516 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 AHCYL1O43865 530 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ZIC3O60481 467 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 FOXD2O60548 495 aaPredicted RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 NOL3O60936 208 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 FZD7O75084 574 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 GPX5O75715 221 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SLC25A12O75746 678 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 LALBAP00709 142 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 MT-ATP6P00846 226 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 HIST1H2ABP04908 130 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 SBK2P0C263 348 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ICAM2P13598 275 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 TCEA1P23193 301 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 SHC1P29353 583 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 GRPRP30550 384 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SDHAP31040 664 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 CD96P40200 585 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 APOBEC1P41238 236 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 SLC25A1P53007 311 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 GABREP78334 506 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 EP300Q09472 2414 aaPredicted RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 MLLT11Q13015 90 aaPredicted RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 SNTA1Q13424 505 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 TMED1Q13445 227 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SGCBQ16585 318 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ANKDD1AQ495B1 522 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 FAM69AQ5T7M9 428 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 LINC01590Q5TEZ4 76 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SLC22A10Q63ZE4 541 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 HIST3H2AQ7L7L0 130 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 MAMDC2Q7Z304 686 aaPredicted RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 MDGA2Q7Z553 956 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 NANOGNBQ7Z5D8 188 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 PLCZ1Q86YW0 608 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 WDFY1Q8IWB7 410 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 FAM98AQ8NCA5 519 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 LSM14AQ8ND56 463 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 OR4K17Q8NGC6 315 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 OR51L1Q8NGJ5 315 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 OR51G2Q8NGK0 314 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 OR5J2Q8NH18 312 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 OR6S1Q8NH40 331 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 GATAD2BQ8WXI9 593 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 HIST1H2ACQ93077 130 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 NKD1Q969G9 470 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SLC25A36Q96CQ1 311 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ZMYND19Q96E35 227 aaPredicted RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 TRMT61AQ96FX7 289 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 MRGPRX4Q96LA9 322 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 PRRX2Q99811 253 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 RNF167Q9H6Y7 350 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ADGRL4Q9HBW9 690 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 SDHAF3Q9NRP4 125 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 MBNL3Q9NUK0 354 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 ASB6Q9NWX5 421 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 HPF1Q9NWY4 346 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ERVK13-1Q9NX77 482 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 MRPL39Q9NYK5 338 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 HAO2Q9NYQ3 351 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 TNFRSF10DQ9UBN6 386 aa6.63□□□□□ -1.35
SPG11-204ENST00000557866 ZNF346Q9UL40 294 aaKnown RBP6.63□□□□□ -1.35
SPG11-204ENST00000557866 PCNX2A6NKB5 2137 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 ANKRD33BA6NCL7 494 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 LIPT2A6NK58 231 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 C12orf71A8MTZ7 269 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 FAM171A2A8MVW0 826 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
SPG11-204ENST00000557866 C11orf98E9PRG8 122 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 MS4A18H0YCH9 400 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 STMND1H3BQB6 276 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 DCTN6O00399 190 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 CCRL2O00421 344 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 SLC22A1O15245 554 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 ZNF208O43345 1280 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 AIREO43918 545 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 TRIM3O75382 744 aaPredicted RBP6.62□□□□□ -1.35
SPG11-204ENST00000557866 AHSA1O95433 338 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 BCL10O95999 233 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 TFP02787 698 aa6.62□□□□□ -1.35
SPG11-204ENST00000557866 OPN1LWP04000 364 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms