RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 UCK2Q9BZX2 261 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 INIPQ9NRY2 104 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 COQ3Q9NZJ6 369 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 NKX1-2Q9UD57 310 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-213ENST00000557644 ADAM18Q9Y3Q7 739 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 GCN1Q92616 2671 aaKnown RBP13.55□□□□□ -0.24
NEDD1-213ENST00000557644 LRRK2Q5S007 2527 aa13.55□□□□□ -0.24
NEDD1-213ENST00000557644 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 CGAP01215 116 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 IGHV3-9P01782 118 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 TP53P04637 393 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 ANXA8P13928 327 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 RPL4P36578 427 aaKnown RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 CTXN1P60606 82 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 PRPS1P60891 318 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 TOP3AQ13472 1001 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 SMARCD3Q6STE5 483 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 CASP12Q6UXS9 341 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 SLC35D2Q76EJ3 337 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 MRGPRGQ86SM5 289 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 ITLN2Q8WWU7 325 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 SAMD8Q96LT4 415 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 OPN3Q9H1Y3 402 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 REV1Q9UBZ9 1251 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 SPTBN1Q01082 2364 aaKnown RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 FREM1Q5H8C1 2179 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 MITFO75030 526 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-213ENST00000557644 AGFG2O95081 481 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 NDUFB2O95178 105 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 CHRNB4P30926 498 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 OPRM1P35372 400 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 ERVK-25P63136 954 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 ACKR1Q16570 336 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 CLEC12AQ5QGZ9 265 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 NIPAL3Q6P499 406 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 RASSF6Q6ZTQ3 369 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 AAED1Q7RTV5 226 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 LUZP2Q86TE4 346 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 OR8D4Q8NGM9 314 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 OR6K3Q8NGY3 331 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 KATNB1Q9BVA0 655 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 GABARAPL1Q9H0R8 117 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 DCLRE1BQ9H816 532 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF556Q9HAH1 456 aa13.54□□□□□ -0.24
NEDD1-213ENST00000557644 SLC35F4A4IF30 521 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 EEF1E1-BLOC1S5C9J1V9 151 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 EEF1E1O43324 174 aaKnown RBP13.53□□□□□ -0.24
NEDD1-213ENST00000557644 MRPL33O75394 65 aaKnown RBP13.53□□□□□ -0.24
NEDD1-213ENST00000557644 SMSP52788 366 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 BIDP55957 195 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 RUNX1T1Q06455 604 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 RFX4Q33E94 735 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 ANKDD1AQ495B1 522 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 CD300LDQ6UXZ3 194 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 STX18Q9P2W9 335 aaKnown RBP13.53□□□□□ -0.24
NEDD1-213ENST00000557644 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 CDH10Q9Y6N8 788 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 A0A1W2PRG6 482 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 FAM90A27PA6NNH2 459 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 SOCS2O14508 198 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 DVL2O14641 736 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 EI24O14681 340 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF432O94892 652 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 IL18BPO95998 194 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 GSTM3P21266 225 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 PPP2R2BQ00005 443 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 CAMK2DQ13557 499 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 LRRC36Q1X8D7 754 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 SLC36A3Q495N2 470 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 CARD17Q5XLA6 110 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 TFAP2EQ6VUC0 442 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 CA5BP1Q8WTZ4 195 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 TMEM45BQ96B21 275 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 TSPAN32Q96QS1 320 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 TACO1Q9BSH4 297 aaKnown RBP13.53□□□□□ -0.24
NEDD1-213ENST00000557644 POLDIP3Q9BY77 421 aaKnown RBP13.53□□□□□ -0.24
NEDD1-213ENST00000557644 PLSCR4Q9NRQ2 329 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 IL20Q9NYY1 176 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-213ENST00000557644 PROCRQ9UNN8 238 aa13.53□□□□□ -0.24
NEDD1-213ENST00000557644 DOPEY1Q5JWR5 2465 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 BCL10O95999 233 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 COX10Q12887 443 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 LPCAT4Q643R3 524 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF100Q8IYN0 542 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 OR2M2Q96R28 347 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 SLC29A1Q99808 456 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 OSBPL10Q9BXB5 764 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 TXNIPQ9H3M7 391 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 NRIP3Q9NQ35 241 aa13.52□□□□□ -0.24
NEDD1-213ENST00000557644 PAPOLBQ9NRJ5 636 aaKnown RBP13.52□□□□□ -0.24
NEDD1-213ENST00000557644 ZNF346Q9UL40 294 aaKnown RBP13.52□□□□□ -0.24
NEDD1-213ENST00000557644 NKX2-6A6NCS4 301 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms