RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ARR3P36575 388 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CDC34P49427 236 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 RAB9AP51151 201 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CCL11P51671 97 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 HERV-K104P63124 156 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 DHODHQ02127 395 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 PAX8Q06710 450 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OVGP1Q12889 678 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 IL18Q14116 193 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OXA1LQ15070 435 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 PDK4Q16654 411 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 BSXQ3C1V8 233 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 BEX5Q5H9J7 111 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TCHHL1Q5QJ38 904 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 C9orf66Q5T8R8 295 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TIGD3Q6B0B8 471 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 KDM4DQ6B0I6 523 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ASRGL1Q7L266 308 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SLC16A14Q7RTX9 510 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TIPARPQ7Z3E1 657 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NUFIP2Q7Z417 695 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 MYPOPQ86VE0 399 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM25Q86YD3 366 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZDHHC21Q8IVQ6 265 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NELFCDQ8IXH7 590 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 METTL4Q8N3J2 472 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TCEANCQ8N8B7 351 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 C4orf32Q8N8J7 132 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 FADS6Q8N9I5 356 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CCDC71LQ8N9Z2 235 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OR6Q1Q8NGQ2 317 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OR13F1Q8NGS4 319 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GPX8Q8TED1 209 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ING5Q8WYH8 240 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 OSTF1Q92882 214 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SGTBQ96EQ0 304 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF486Q96H40 463 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 RNF170Q96K19 258 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM56Q96MV1 263 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 HBEGFQ99075 208 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NIPSNAP1Q9BPW8 284 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 DDA1Q9BW61 102 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 WFDC1Q9HC57 220 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GPN1Q9HCN4 374 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 PALMDQ9NP74 551 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NGBQ9NPG2 151 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 B3GAT2Q9NPZ5 323 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF581Q9P0T4 197 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 HECW2Q9P2P5 1572 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 BAIAP2L1Q9UHR4 511 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CRLS1Q9UJA2 301 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CEP170BQ9Y4F5 1589 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM56-RWDD3S4R434 201 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 YLPM1P49750 1951 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZC3H13Q5T200 1668 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ITSN2Q9NZM3 1697 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 KDM5DQ9BY66 1539 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ARHGEF12Q9NZN5 1544 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ARHGEF10O15013 1369 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TARBP1Q13395 1621 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 HFM1A2PYH4 1435 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 FOCADQ5VW36 1801 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 A0A087WZY1 265 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1W2PPE3 182 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM213A2RRL7 107 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SMIM30A4D0T7 59 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GLTPD2A6NH11 291 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 WASH3PC4AMC7 463 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 E5RGE8 158 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 E5RI56 91 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LRRN3E7EW58 273 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NPIPA2E9PIF3 369 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 BCL2L11O43521 198 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 TYROBPO43914 113 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 GMFGO60234 142 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CST4P01036 141 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 IGHG3P01860 377 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 DCNP07585 359 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF883P0CG24 379 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 HSPD1P10809 573 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SPI1P17947 270 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ME2P23368 584 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 SHC1P29353 583 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ERP29P30040 261 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NUP62P37198 522 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CEBPDP49716 269 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CDK9P50750 372 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LIMK2P53671 638 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 FGF8P55075 233 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 RPL23AP62750 156 aaKnown RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 CCL7P80098 99 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 FLI1Q01543 452 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 USF2Q15853 346 aaPredicted RBP1.37□□□□□ -2.19
HIF1A-212ENST00000557538 NDUFAF6Q330K2 333 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 LIN52Q52LA3 116 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 DNLZQ5SXM8 178 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 AGAP7PQ5VUJ5 663 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 RESP18Q5W5W9 173 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
HIF1A-212ENST00000557538 ARMCX5Q6P1M9 558 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms