RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CT45A9P0DMV2 189 aa2.58□□□□□ -2
VRK1-207ENST00000557352 CD9P21926 228 aa2.58□□□□□ -2
VRK1-207ENST00000557352 SLC26A3P40879 764 aa2.58□□□□□ -2
VRK1-207ENST00000557352 CCR2P41597 374 aa2.58□□□□□ -2
VRK1-207ENST00000557352 MAGEA12P43365 314 aa2.58□□□□□ -2
VRK1-207ENST00000557352 ARHGDIBP52566 201 aa2.58□□□□□ -2
VRK1-207ENST00000557352 SMSP52788 366 aa2.58□□□□□ -2
VRK1-207ENST00000557352 AP1S1P61966 158 aa2.58□□□□□ -2
VRK1-207ENST00000557352 RPS24P62847 133 aaKnown RBP2.58□□□□□ -2
VRK1-207ENST00000557352 IFFO1Q0D2I5 559 aa2.58□□□□□ -2
VRK1-207ENST00000557352 SLC10A7Q0GE19 358 aa2.58□□□□□ -2
VRK1-207ENST00000557352 HSPA14Q0VDF9 509 aa2.58□□□□□ -2
VRK1-207ENST00000557352 ZNF235Q14590 738 aa2.58□□□□□ -2
VRK1-207ENST00000557352 HEPACAMQ14CZ8 416 aa2.58□□□□□ -2
VRK1-207ENST00000557352 PDGFRLQ15198 375 aa2.58□□□□□ -2
VRK1-207ENST00000557352 TRIP13Q15645 432 aaPredicted RBP2.58□□□□□ -2
VRK1-207ENST00000557352 LRIT3Q3SXY7 679 aa2.58□□□□□ -2
VRK1-207ENST00000557352 CT45A2Q5DJT8 189 aa2.58□□□□□ -2
VRK1-207ENST00000557352 LGSNQ5TDP6 509 aa2.58□□□□□ -2
VRK1-207ENST00000557352 PDPK2PQ6A1A2 396 aa2.58□□□□□ -2
VRK1-207ENST00000557352 C3orf62Q6ZUJ4 267 aa2.58□□□□□ -2
VRK1-207ENST00000557352 TGIF2LYQ8IUE0 185 aa2.58□□□□□ -2
VRK1-207ENST00000557352 MKXQ8IYA7 352 aa2.58□□□□□ -2
VRK1-207ENST00000557352 FBXO36Q8NEA4 188 aa2.58□□□□□ -2
VRK1-207ENST00000557352 RAB3IL1Q8TBN0 382 aa2.58□□□□□ -2
VRK1-207ENST00000557352 DCAKDQ8WVC6 231 aa2.58□□□□□ -2
VRK1-207ENST00000557352 CDKL2Q92772 493 aa2.58□□□□□ -2
VRK1-207ENST00000557352 BCL2L2Q92843 193 aaPredicted RBP2.58□□□□□ -2
VRK1-207ENST00000557352 ECHDC3Q96DC8 303 aa2.58□□□□□ -2
VRK1-207ENST00000557352 TMA16Q96EY4 203 aaKnown RBP2.58□□□□□ -2
VRK1-207ENST00000557352 CERS2Q96G23 380 aa2.58□□□□□ -2
VRK1-207ENST00000557352 CABS1Q96KC9 395 aa2.58□□□□□ -2
VRK1-207ENST00000557352 C9orf72Q96LT7 481 aa2.58□□□□□ -2
VRK1-207ENST00000557352 XPO6Q96QU8 1125 aaKnown RBP2.58□□□□□ -2
VRK1-207ENST00000557352 TRIB3Q96RU7 358 aa2.58□□□□□ -2
VRK1-207ENST00000557352 TBL1YQ9BQ87 522 aa2.58□□□□□ -2
VRK1-207ENST00000557352 FEM1AQ9BSK4 669 aa2.58□□□□□ -2
VRK1-207ENST00000557352 NMUR2Q9GZQ4 415 aa2.58□□□□□ -2
VRK1-207ENST00000557352 TRABDQ9H4I3 376 aa2.58□□□□□ -2
VRK1-207ENST00000557352 ZNF702PQ9H963 129 aa2.58□□□□□ -2
VRK1-207ENST00000557352 RBM22Q9NW64 420 aaKnown RBP eCLIP2.58□□□□□ -2
VRK1-207ENST00000557352 LHX3Q9UBR4 397 aa2.58□□□□□ -2
VRK1-207ENST00000557352 APOBEC3BQ9UH17 382 aaKnown RBP2.58□□□□□ -2
VRK1-207ENST00000557352 GGA2Q9UJY4 613 aa2.58□□□□□ -2
VRK1-207ENST00000557352 MRTO4Q9UKD2 239 aaKnown RBP2.58□□□□□ -2
VRK1-207ENST00000557352 SNX10Q9Y5X0 201 aa2.58□□□□□ -2
VRK1-207ENST00000557352 RP1P56715 2156 aa2.58□□□□□ -2
VRK1-207ENST00000557352 UNC13CQ8NB66 2214 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TMEM131Q92545 1883 aa2.57□□□□□ -2
VRK1-207ENST00000557352 IGLV8-61A0A075B6I0 122 aa2.57□□□□□ -2
VRK1-207ENST00000557352 A0A0D9SEW6 157 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TSPAN11A1L157 253 aa2.57□□□□□ -2
VRK1-207ENST00000557352 SH3PXD2BA1X283 911 aa2.57□□□□□ -2
VRK1-207ENST00000557352 RGSL1A5PLK6 1076 aa2.57□□□□□ -2
VRK1-207ENST00000557352 FAM47DPA6NHR8 397 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TCP11X1B4DZS4 312 aa2.57□□□□□ -2
VRK1-207ENST00000557352 CHEK1O14757 476 aa2.57□□□□□ -2
VRK1-207ENST00000557352 CCL16O15467 120 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TYROBPO43914 113 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TBL1XO60907 577 aa2.57□□□□□ -2
VRK1-207ENST00000557352 ECI2O75521 394 aa2.57□□□□□ -2
VRK1-207ENST00000557352 SERF1AO75920 110 aa2.57□□□□□ -2
VRK1-207ENST00000557352 NEBLO76041 1014 aa2.57□□□□□ -2
VRK1-207ENST00000557352 GOSR1O95249 250 aa2.57□□□□□ -2
VRK1-207ENST00000557352 NUDT14O95848 222 aa2.57□□□□□ -2
VRK1-207ENST00000557352 SNRPAP09012 282 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 ALOX5P09917 674 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TPBGLP0DKB5 382 aa2.57□□□□□ -2
VRK1-207ENST00000557352 PVRP15151 417 aa2.57□□□□□ -2
VRK1-207ENST00000557352 OGNP20774 298 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 FCARP24071 287 aa2.57□□□□□ -2
VRK1-207ENST00000557352 ACP1P24666 158 aa2.57□□□□□ -2
VRK1-207ENST00000557352 MDH1P40925 334 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 XCR1P46094 333 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TNFSF10P50591 281 aa2.57□□□□□ -2
VRK1-207ENST00000557352 SGSHP51688 502 aa2.57□□□□□ -2
VRK1-207ENST00000557352 MAGOHP61326 146 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 NAA20P61599 178 aa2.57□□□□□ -2
VRK1-207ENST00000557352 NPRL3Q12980 569 aa2.57□□□□□ -2
VRK1-207ENST00000557352 RPA4Q13156 261 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TAF1AQ15573 450 aaPredicted RBP2.57□□□□□ -2
VRK1-207ENST00000557352 RTL6Q6ICC9 239 aa2.57□□□□□ -2
VRK1-207ENST00000557352 RHBDD2Q6NTF9 364 aa2.57□□□□□ -2
VRK1-207ENST00000557352 B3GLCTQ6Y288 498 aa2.57□□□□□ -2
VRK1-207ENST00000557352 MFSD6LQ8IWD5 586 aa2.57□□□□□ -2
VRK1-207ENST00000557352 BBS7Q8IWZ6 715 aa2.57□□□□□ -2
VRK1-207ENST00000557352 OR2AP1Q8NGE2 309 aa2.57□□□□□ -2
VRK1-207ENST00000557352 OR52K2Q8NGK3 314 aa2.57□□□□□ -2
VRK1-207ENST00000557352 OR52K1Q8NGK4 314 aa2.57□□□□□ -2
VRK1-207ENST00000557352 OR6M1Q8NGM8 313 aa2.57□□□□□ -2
VRK1-207ENST00000557352 BRSK1Q8TDC3 778 aa2.57□□□□□ -2
VRK1-207ENST00000557352 SMARCD2Q92925 531 aa2.57□□□□□ -2
VRK1-207ENST00000557352 TCEAL4Q96EI5 215 aa2.57□□□□□ -2
VRK1-207ENST00000557352 MSANTD3Q96H12 275 aa2.57□□□□□ -2
VRK1-207ENST00000557352 CELF6Q96J87 481 aaKnown RBP2.57□□□□□ -2
VRK1-207ENST00000557352 ZNF641Q96N77 438 aaPredicted RBP2.57□□□□□ -2
VRK1-207ENST00000557352 CYP2S1Q96SQ9 504 aa2.57□□□□□ -2
VRK1-207ENST00000557352 GPR22Q99680 433 aa2.57□□□□□ -2
VRK1-207ENST00000557352 RBBP8Q99708 897 aa2.57□□□□□ -2
VRK1-207ENST00000557352 NTMT1Q9BV86 223 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms