RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 THBS4P35443 961 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 SCARB2Q14108 478 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 OR1Q1Q15612 314 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 IQCCQ4KMZ1 466 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 AGBL2Q5U5Z8 902 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 FAM166AQ6J272 317 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 C20orf196Q8IYI0 205 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 ARIH2OSQ8N7S6 290 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 LRR1Q96L50 414 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 EVA1AQ9H8M9 152 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 SLCO1B3Q9NPD5 702 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 TESQ9UGI8 421 aaKnown RBP13.77□□□□□ -0.21
TUBB3-213ENST00000557262 SLC13A4Q9UKG4 626 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 KCNS2Q9ULS6 477 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 USP22Q9UPT9 525 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 CORINQ9Y5Q5 1042 aa13.77□□□□□ -0.21
TUBB3-213ENST00000557262 TRBV5-3A0A0A0MS03 114 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 IGHV2OR16-5A0A0B4J2B6 119 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 hCG_2039718K7EN88 272 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 M0R3G1 203 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 HPRP00739 348 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 BGLAPP02818 100 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 ERCC1P07992 297 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-213ENST00000557262 HLA-DOBP13765 273 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 THBS2P35442 1172 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 CAPZA2P47755 286 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 RGS8P57771 180 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-213ENST00000557262 NCALDP61601 193 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 AGKQ53H12 422 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 PHYHD1Q5SRE7 291 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 NHLRC1Q6VVB1 395 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 MDP1Q86V88 176 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-213ENST00000557262 SCAIQ8N9R8 606 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 NEU4Q8WWR8 484 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-213ENST00000557262 MSI2Q96DH6 328 aaKnown RBP13.76□□□□□ -0.21
TUBB3-213ENST00000557262 EMC6Q9BV81 110 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 ASPNQ9BXN1 380 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 B3GNT2Q9NY97 397 aa13.76□□□□□ -0.21
TUBB3-213ENST00000557262 A0A0B4J2E0 115 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 IGHV4-61A0A0C4DH41 118 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 A0A1B0GX12 115 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 SLC35F4A4IF30 521 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF503-AS2A6NEH8 195 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF726A6NNF4 738 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 TPST2O60704 377 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 MFN2O95140 757 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 STAMBPO95630 424 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF23P17027 643 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 IGFBP5P24593 272 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 ATP4BP51164 291 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 AQP5P55064 265 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 NPRL3Q12980 569 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 PMS2P3Q13401 168 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 ADRM1Q16186 407 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 CARD17Q5XLA6 110 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 SPATA21Q7Z572 469 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 ARMC8Q8IUR7 673 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 HIPK4Q8NE63 616 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 TXNDC15Q96J42 360 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 WFDC6Q9BQY6 131 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 BPESC1Q9GZL8 116 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 MRPL39Q9NYK5 338 aaKnown RBP13.75□□□□□ -0.21
TUBB3-213ENST00000557262 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-213ENST00000557262 NOX1Q9Y5S8 564 aa13.75□□□□□ -0.21
TUBB3-213ENST00000557262 SH3PXD2BA1X283 911 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 SEC14L2O76054 403 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 TGFAP01135 160 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 DAOP14920 347 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 GIFP27352 417 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 AQP1P29972 269 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 CDH12P55289 794 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 POU3F1Q03052 451 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-213ENST00000557262 DAG1Q14118 895 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 DLEU7Q6UYE1 221 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 ZNF627Q7L945 461 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 PXKQ7Z7A4 578 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 RANBP3LQ86VV4 465 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-213ENST00000557262 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 ZCCHC24Q8N2G6 241 aaKnown RBP13.74□□□□□ -0.21
TUBB3-213ENST00000557262 SVOPLQ8N434 492 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 MOGAT1Q96PD6 335 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 TMEM43Q9BTV4 400 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 CHODLQ9H9P2 273 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 MED29Q9NX70 200 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 POFUT2Q9Y2G5 429 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 CMAHPQ9Y471 501 aa13.74□□□□□ -0.21
TUBB3-213ENST00000557262 MALRD1Q5VYJ5 2156 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 PLPP3O14495 311 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 HLA-HP01893 362 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 CD79AP11912 226 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 SRD5A1P18405 259 aa13.73□□□□□ -0.21
TUBB3-213ENST00000557262 NR4A1P22736 598 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms