RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 OR7E24Q6IFN5 339 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 SLC48A1Q6P1K1 146 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 TMEM71Q6P5X7 295 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 KCTD18Q6PI47 426 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 MAMSTRQ6ZN01 415 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 MEX3BQ6ZN04 569 aaKnown RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ZNF765Q7L2R6 523 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 P4HA3Q7Z4N8 544 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 LAS2Q8IYD9 372 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 RNF113BQ8IZP6 322 aaKnown RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 GPR32P1Q8NGA4 272 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 OR10Z1Q8NGY1 313 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 OR2T27Q8NH04 317 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 HSD17B8Q92506 261 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 SMARCD2Q92925 531 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 EID2BQ96D98 161 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 DERL3Q96Q80 235 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ARHGDIGQ99819 225 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 C2orf42Q9NWW7 574 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 SIDT1Q9NXL6 827 aaKnown RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ZNF230Q9UIE0 474 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ADAM29Q9UKF5 820 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 RHBDD3Q9Y3P4 386 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 PRSS38A1L453 326 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ZNF705GA8MUZ8 300 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 C17orf105B2RV13 164 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 PLA2G10O15496 165 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 CNOT4O95628 575 aaKnown RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 SFTA3P0C7M3 94 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 CCNOP22674 350 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 IRS1P35568 1242 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 NPY4RP50391 375 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 CSNK1G2P78368 415 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 C1orf61Q13536 156 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 GPNMBQ14956 572 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ARHGAP11BQ3KRB8 267 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 LGALSLQ3ZCW2 172 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 TCTN3Q6NUS6 607 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ZNF529Q6P280 563 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 TTLL10Q6ZVT0 673 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 LINC00346Q8IVM7 164 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 CDRT4Q8N9R6 151 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ANKRD53Q8N9V6 530 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 OR7G2Q8NG99 324 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 OR51D1Q8NGF3 324 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 SLC22A8Q8TCC7 542 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 HCAR2Q8TDS4 363 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 PNPLA2Q96AD5 504 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 FAM3DQ96BQ1 224 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 TGIF2Q9GZN2 237 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 PITHD1Q9GZP4 211 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 GPATCH2Q9NW75 528 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 MRPL22Q9NWU5 206 aaKnown RBP4.59□□□□□ -1.67
SYNE2-223ENST00000557005 GFOD1Q9NXC2 390 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 LRFN1Q9P244 771 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 CPNE7Q9UBL6 633 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 POMT2Q9UKY4 750 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 GPR34Q9UPC5 381 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 ADAM18Q9Y3Q7 739 aa4.59□□□□□ -1.67
SYNE2-223ENST00000557005 A0A0A6YYC8 382 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-223ENST00000557005 RPS10-NUDT3A0A1W2PQS6 291 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 IDSB3KWA1 339 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 I3L1I5 382 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-223ENST00000557005 DNAJB6O75190 326 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 PMS2P2O95744 297 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 HEXBP07686 556 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 OR8U9P0C7N5 309 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CCL5P13501 91 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 RPS10P46783 165 aaKnown RBP4.59□□□□□ -1.68
SYNE2-223ENST00000557005 MECP2P51608 486 aaKnown RBP4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CXADRP78310 365 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CAMK2BQ13554 666 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 PRSS53Q2L4Q9 553 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 RHOUQ7L0Q8 258 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 KIAA0907Q7Z7F0 614 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-223ENST00000557005 C7orf61Q8IZ16 206 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 MIB2Q96AX9 1013 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 APOOQ9BUR5 198 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CNTNAP3Q9BZ76 1288 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 WDR76Q9H967 626 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 TAF9BQ9HBM6 251 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 DZANK1Q9NVP4 752 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 EHFQ9NZC4 300 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CYP8B1Q9UNU6 501 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 PSME4Q14997 1843 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 A0A0A6YYD5 115 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 TRAV20A0A0B4J274 112 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 A0A1W2PR48 441 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 TMEM212A6NML5 194 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 AIPO00170 330 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 SLC16A7O60669 478 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 IFNA2P01563 188 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 F11P03951 625 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 JMJD7P0C870 316 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CALCBP10092 127 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 CPT2P23786 658 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 TEAD1P28347 426 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 MAGEB1P43366 347 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 SLC7A9P82251 487 aa4.59□□□□□ -1.68
SYNE2-223ENST00000557005 PDZK1IP1Q13113 114 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms