RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 COX4I2Q96KJ9 171 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 MOGAT1Q96PD6 335 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 NELFAQ9H3P2 528 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 UPB1Q9UBR1 384 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 RCE1Q9Y256 329 aa9.05□□□□□ -0.96
SHMT2-224ENST00000556737 LRRN3E7EW58 273 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 M0QX08 132 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ARHGEF9O43307 516 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 CHP2O43745 196 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 OR2T1O43869 369 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 UPK3AO75631 287 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF432O94892 652 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF682O95780 498 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 HPRP00739 348 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ATP6V1B2P21281 511 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 CD40P25942 277 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 GTF2E2P29084 291 aaKnown RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF83P51522 516 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 CDH11P55287 796 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 CLDN17P56750 224 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ACTR3P61158 418 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 RPS4XP62701 263 aaKnown RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 CCNIQ14094 377 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 HIKESHIQ53FT3 197 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 INTS11Q5TA45 600 aaKnown RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF613Q6PF04 617 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 TMEM108Q6UXF1 575 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 NHLRC1Q6VVB1 395 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 LINC00114Q6XXX2 140 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 DTX2Q86UW9 622 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 WDFY1Q8IWB7 410 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 TMEM123Q8N131 208 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 OR1K1Q8NGR3 316 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 VANGL1Q8TAA9 524 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 SMAP2Q8WU79 429 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 C18orf12Q96KH6 178 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 Q96MF0 132 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 MCHR1Q99705 422 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 SMR3AQ99954 134 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 TMEM43Q9BTV4 400 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 TRAF4Q9BUZ4 470 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 LINC00470Q9BZP3 86 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 CXorf56Q9H5V9 222 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 TMEM27Q9HBJ8 222 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ACTR3BQ9P1U1 418 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 SLC13A4Q9UKG4 626 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 AURKCQ9UQB9 309 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 LAMP3Q9UQV4 416 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 AMDHD2Q9Y303 409 aa9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ANK3Q12955 4377 aaKnown RBP9.04□□□□□ -0.96
SHMT2-224ENST00000556737 ARID1AO14497 2285 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 ZANQ9Y493 2812 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 LOC102725191A0A1B0GVB3 256 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 TRIM64A6NGJ6 449 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 TRIM64BA6NI03 449 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 CPSF4LA6NMK7 179 aaKnown RBP9.03□□□□□ -0.96
SHMT2-224ENST00000556737 E7EQL1 145 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 M0R1B8 84 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 KRT36O76013 467 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 BAG2O95816 211 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 SERPINA1P01009 418 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 CD8AP01732 235 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 HLA-DOBP13765 273 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 CBLP22681 906 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 PTAFRP25105 342 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 CDKN1AP38936 164 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 ENTPD8Q5MY95 495 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 C1QTNF12Q5T7M4 302 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 C11orf71Q6IPW1 123 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 LCN8Q6JVE9 175 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 SCAIQ8N9R8 606 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 PYDC1Q8WXC3 89 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 OXGR1Q96P68 337 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF426Q9BUY5 554 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 B3GALT5Q9Y2C3 310 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 PLCE1Q9P212 2302 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 USF3Q68DE3 2245 aa9.03□□□□□ -0.96
SHMT2-224ENST00000556737 ARPC4-TTLL3A0A0A6YYG9 625 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 DHRS12A0PJE2 317 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 OR6C65A6NJZ3 312 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 AQP12BA6NM10 295 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MS4A18H0YCH9 400 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 RPL36A-HNRNPH2H7BZ11 118 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 H7C1Q1 480 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 ACOT8O14734 319 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 FKBP6O75344 327 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 IFNA14P01570 189 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 INHBBP09529 407 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF43P17038 809 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 CDH2P19022 906 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 TNFRSF1BP20333 461 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 ROR2Q01974 943 aaKnown RBP9.02□□□□□ -0.97
SHMT2-224ENST00000556737 TGFBR3Q03167 851 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 VEZF1Q14119 521 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MFSD13AQ14CX5 517 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MS4A18Q3C1V0 323 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 TBRG1Q3YBR2 411 aa9.02□□□□□ -0.97
SHMT2-224ENST00000556737 MTX3Q5HYI7 312 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms