RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ERI1Q8IV48 349 aaKnown RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 SLC39A11Q8N1S5 342 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 CATSPER1Q8NEC5 780 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 KLHL30-AS1Q8NEE0 82 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 OR1L6Q8NGR2 347 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 OR13F1Q8NGS4 319 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 FAM222BQ8WU58 562 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 NEIL2Q969S2 332 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PAGE5Q96GU1 130 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 ZNF414Q96IQ9 312 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PGLYRP4Q96LB8 373 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 OLFM3Q96PB7 478 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TBX15Q96SF7 602 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 MTG1Q9BT17 334 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 STMN4Q9H169 189 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 Q9H3A6 140 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 NARFLQ9H6Q4 476 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 EXO5Q9H790 373 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PTGES2Q9H7Z7 377 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 FOLH1BQ9HBA9 442 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PARVBQ9HBI1 364 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 TMEM165Q9HC07 324 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 RMND1Q9NWS8 449 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 PISDQ9UG56 409 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 NUP50Q9UKX7 468 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 UBQLN1Q9UMX0 589 aaKnown RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 KCNIP3Q9Y2W7 256 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 CSAG2Q9Y5P2 127 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 BZW2Q9Y6E2 419 aaKnown RBP3.27□□□□□ -1.89
PRPF39-210ENST00000556718 COMMD3-BMI1R4GMX3 469 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 FRMPD3Q5JV73 1810 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 ADGRL1O94910 1474 aa3.27□□□□□ -1.89
PRPF39-210ENST00000556718 LAMC1P11047 1609 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 MSH6P52701 1360 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 PCF11O94913 1555 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 PRDM15P57071 1507 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 ABCA10Q8WWZ4 1543 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 OR5B21A6NL26 309 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 LOC110117498-PIK3R3F6TDL0 507 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 CDX4O14627 284 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 CASQ2O14958 399 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SERF1AO75920 110 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 YEATS4O95619 227 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 TMEM50AO95807 157 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 THY1P04216 161 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SERPIND1P05546 499 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 CRYGBP07316 175 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 RBMY1CP0DJD4 496 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SHMT2P34897 504 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 HSPA9P38646 679 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 DDOSTP39656 456 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 PTGDSP41222 190 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 BIDP55957 195 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 RGS8P57771 180 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 KCNJ2P63252 427 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 ENPEPQ07075 957 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 ITIH4Q14624 930 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 PARP15Q460N3 678 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 C6orf89Q6UWU4 347 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 BAIAP2L2Q6UXY1 529 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 NCCRP1Q6ZVX7 275 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SPATA24Q86W54 205 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 C17orf82Q86X59 251 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 MARCH9Q86YJ5 346 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 PSTKQ8IV42 348 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 CD302Q8IX05 232 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 FNDC5Q8NAU1 212 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 OR2L3Q8NG85 312 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 OR4K14Q8NGD5 310 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SLC22A8Q8TCC7 542 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 DNAJA4Q8WW22 397 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 GTSF1Q8WW33 167 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 KIFAP3Q92845 792 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 LRRC45Q96CN5 670 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SMIM14Q96QK8 99 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 HIST1H4GQ99525 98 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 LLPHQ9BRT6 129 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SELENOIQ9C0D9 397 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 QPCTLQ9NXS2 382 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 UBAP1Q9NZ09 502 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 TREM2Q9NZC2 230 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 STAP1Q9ULZ2 295 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 RPL26L1Q9UNX3 145 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 LRRC42Q9Y546 428 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SAR1BQ9Y6B6 198 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 DENND4BO75064 1496 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 SHANK2Q9UPX8 1470 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 C9orf84Q5VXU9 1444 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 YTHDC2Q9H6S0 1430 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 CLTCL1P53675 1640 aa3.26□□□□□ -1.89
PRPF39-210ENST00000556718 EIF2AK4Q9P2K8 1649 aaKnown RBP3.26□□□□□ -1.89
PRPF39-210ENST00000556718 NUP155O75694 1391 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 UGGT2Q9NYU1 1516 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 IGHV1OR15-1A0A075B7D0 117 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 A0A1W2PPE3 182 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 WRBO00258 174 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 DCTN6O00399 190 aa3.25□□□□□ -1.89
PRPF39-210ENST00000556718 HSD17B6O14756 317 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms