RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 A3GALT2U3KPV4 340 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 COL27A1Q8IZC6 1860 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 SHISA3A0PJX4 238 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 CASKO14936 926 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 MT-ATP6P00846 226 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 OR2T7P0C7T2 308 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 TFPIP10646 304 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 APEHP13798 732 aaKnown RBP16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 ZNF41P51814 821 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 GGTLC2Q14390 218 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 EXT1Q16394 746 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 ACKR1Q16570 336 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 SGCBQ16585 318 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 GLYR1Q49A26 553 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 C6orf15Q6UXA7 325 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 OR6V1Q8N148 313 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 OR2T27Q8NH04 317 aa16.53■□□□□ 0.24
SDR39U1-220ENST00000556548 A0A1W2PNU3 283 aaPredicted RBP16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 G3V3Y1 287 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 DKK1O94907 266 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 TXNDC12O95881 172 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 HLA-DOBP13765 273 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 RPS27P42677 84 aaKnown RBP16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 MELKQ14680 651 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 OXA1LQ15070 435 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 SLC35D3Q5M8T2 416 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 PARP16Q8N5Y8 322 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 EXD3Q8N9H8 876 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 STK35Q8TDR2 534 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 CT55Q8WUE5 264 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 RNF138Q8WVD3 245 aa16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 SMAD5Q99717 465 aaKnown RBP16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 CHCHD2Q9Y6H1 151 aaPredicted RBP16.52■□□□□ 0.24
SDR39U1-220ENST00000556548 PLPP3O14495 311 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 EFNA2O43921 213 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 IL1AP01583 271 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 FGF9P31371 208 aaPredicted RBP16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 PSMB10P40306 273 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 RUNX1T1Q06455 604 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 FAM27D1Q5T7N8 215 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 DHRS13Q6UX07 377 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 GPALPP1Q8IXQ4 340 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 NEIL3Q8TAT5 605 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 HPS1Q92902 700 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 CEP19Q96LK0 163 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 TCFL5Q9UL49 500 aa16.52■□□□□ 0.23
SDR39U1-220ENST00000556548 XKRYO14609 159 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 RENP00797 406 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 RCVRNP35243 200 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 APOBEC1P41238 236 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 BDH1Q02338 343 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 C19orf57Q0VDD7 668 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 NDUFAF7Q7L592 441 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 LAX1Q8IWV1 398 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 OR13C5Q8NGS8 318 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ASB15Q8WXK1 588 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 TAAR9Q96RI9 348 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 MROQ9BYG7 248 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ABCB10Q9NRK6 738 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 SDHAF3Q9NRP4 125 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ACOXLQ9NUZ1 547 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ANKRD10Q9NXR5 420 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 FOXJ2Q9P0K8 574 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 NCDNQ9UBB6 729 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 PLEKHB1Q9UF11 243 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 DAPK2Q9UIK4 370 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 A0A1W2PRG6 482 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 C9orf172C9J069 976 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ZNF806P0C7X5 589 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 GTF2E2P29084 291 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 CENPAP49450 140 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 SLC25A1P53007 311 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 PPP5CP53041 499 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 SUMO3P55854 103 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 SF3B4Q15427 424 aaKnown RBP eCLIP16.51■□□□□ 0.235e-10■■□□□ 13.9
SDR39U1-220ENST00000556548 PLPPR5Q32ZL2 321 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 EMC4Q5J8M3 183 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 WDSUB1Q8N9V3 476 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 M1APQ8TC57 530 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 PELI1Q96FA3 418 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 PPIL3Q9H2H8 161 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 TMEM9BQ9NQ34 198 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 POLE4Q9NR33 117 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 CRNNQ9UBG3 495 aaPredicted RBP16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 PCDHGB7Q9Y5F8 929 aa16.51■□□□□ 0.23
SDR39U1-220ENST00000556548 ANKRD34BA5PLL1 514 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 PRR32B1ATL7 298 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 FTCDNL1E5RQL4 147 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 TBX1O43435 398 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 OR2T1O43869 369 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 RGS9O75916 674 aaPredicted RBP16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 CD40LGP29965 261 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 TNFSF8P32971 234 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 MADCAM1Q13477 382 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 GPR139Q6DWJ6 353 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 PPP1R32Q7Z5V6 425 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 CADM3Q8N126 398 aa16.5■□□□□ 0.23
SDR39U1-220ENST00000556548 OR2M3Q8NG83 312 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms