RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 FRMD1Q8N878 549 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 FAM181AQ8N9Y4 354 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 OR6F1Q8NGZ6 308 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 UBASH3BQ8TF42 649 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TSACCQ96A04 125 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RNF125Q96EQ8 232 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SAMD8Q96LT4 415 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CMSS1Q9BQ75 279 aaKnown RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SERINC1Q9NRX5 453 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM74BQ9NUR3 256 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 PARPBPQ9NWS1 579 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CLDND1Q9NY35 253 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 THADAQ6YHU6 1953 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 M0R129 80 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 MT-ND2P03891 347 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CSF2P04141 144 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ADRA2AP08913 450 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CTXN2P0C2S0 81 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SOX18P35713 384 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 GGT2P36268 569 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SLAMF1Q13291 335 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 NCR3LG1Q68D85 454 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ENPP7Q6UWV6 458 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SSX7Q7RTT5 188 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 LHFPL4Q7Z7J7 247 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 GPAT4Q86UL3 456 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 PAQR7Q86WK9 346 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RAB43Q86YS6 212 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 NRMQ8IXM6 262 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RAB42Q8N4Z0 105 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 OR4E2Q8NGC2 313 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 OR11L1Q8NGX0 322 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RPLP0P6Q8NHW5 317 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RAB2BQ8WUD1 216 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TSEN15Q8WW01 171 aaKnown RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RASD2Q96D21 266 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 EAF1Q96JC9 268 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 APOL4Q9BPW4 351 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 FUZQ9BT04 418 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ANKRA2Q9H9E1 313 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RHOFQ9HBH0 211 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 MKKSQ9NPJ1 570 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 POT1Q9NUX5 634 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SLCO1C1Q9NYB5 712 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 NAGKQ9UJ70 344 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF281Q9Y2X9 895 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TRBV4-1A0A0J9YWV2 114 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CTSVO60911 334 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 PTTG1O95997 202 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 OR12D1P0DN82 309 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CD8BP10966 210 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 DRD2P14416 443 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 GABRG2P18507 467 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RAB6AP20340 208 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ZP3P21754 424 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF41P51814 821 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RAB8AP61006 207 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TLE4Q04727 773 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 DOC2BQ14184 412 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 GK2Q14410 553 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CCDC157Q569K6 752 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 NCMAPQ5T1S8 102 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 KLHL17Q6TDP4 642 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 WDR88Q6ZMY6 472 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 BIVMQ86UB2 503 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 C17orf47Q8NEP4 570 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 OR1N1Q8NGS0 311 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 STK35Q8TDR2 534 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 MRGPRDQ8TDS7 321 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 C3orf49Q96BT1 292 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 R3HDM4Q96D70 268 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF681Q96N22 645 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 WFIKKN1Q96NZ8 548 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 MS4A7Q9GZW8 240 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 OR51I1Q9H343 314 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 C6orf106Q9H6K1 298 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ACOT13Q9NPJ3 140 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF226Q9NYT6 803 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CNIH4Q9P003 139 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 FTSJ1Q9UET6 329 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 KCNG2Q9UJ96 466 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TCRBV21S2A2A0A5A6 115 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 OR14I1A6ND48 311 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ARRDC5A6NEK1 342 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CLCA1A8K7I4 914 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ADAM10O14672 748 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 P2RX6O15547 441 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 NME6O75414 186 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 FBXO24O75426 580 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GABARAPO95166 117 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GADD45GO95257 159 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ONECUT2O95948 504 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 GASTP01350 101 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 IFNW1P05000 195 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 CHRM4P08173 479 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 F3P13726 295 aa4.67□□□□□ -1.66
TMEM260-210ENST00000556422 ELAVL4P26378 380 aaKnown RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 C21orf33P30042 268 aaPredicted RBP4.67□□□□□ -1.66
TMEM260-210ENST00000556422 DDOSTP39656 456 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms