RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PPIAL4EA0A075B759 164 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 IGHV3-64DA0A0J9YX35 117 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 BTBD17A6NE02 478 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 C12orf71A8MTZ7 269 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 GOLGA8SH3BPF8 625 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SLC31A2O15432 143 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 UPK3AO75631 287 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 PALMO75781 387 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 TNFSF13O75888 250 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 IGHV2-5P01817 119 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 MMP1P03956 469 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 PPIAL4FP0DN26 164 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 MX1P20591 662 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 FMO3P31513 532 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 CRYBB2P43320 205 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 RPS10P46783 165 aaKnown RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 LHX2P50458 406 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 CRISP3P54108 245 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SH3BGRP55822 239 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 ERVK-25P63136 954 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 IRX3P78415 501 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 BST1Q10588 318 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 MRPL28Q13084 256 aaKnown RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 EBI3Q14213 229 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 ZMYND11Q15326 602 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 TFDP3Q5H9I0 405 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 RUFY3Q7L099 469 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 TGIF2LXQ8IUE1 241 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 PSTKQ8IV42 348 aaKnown RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 ACOT4Q8N9L9 421 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 FNDC5Q8NAU1 212 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SDR9C7Q8NEX9 313 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 OR2L3Q8NG85 312 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 OR10G9Q8NGN4 311 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SMARCD2Q92925 531 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 TUBGCP3Q96CW5 907 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 MS4A4EQ96PG1 132 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 FMO2Q99518 471 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 RIOK1Q9BRS2 568 aaKnown RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 PELOQ9BRX2 385 aaKnown RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 GCOM2Q9BZD3 368 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-218ENST00000556256 ROGDIQ9GZN7 287 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 GBA3Q9H227 469 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SIAEQ9HAT2 523 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 NT5MQ9NPB1 228 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 GLRX2Q9NS18 164 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SUN2Q9UH99 717 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 MMP17Q9ULZ9 603 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 SLC25A15Q9Y619 301 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 GAKO14976 1311 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 CDHR2Q9BYE9 1310 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 CDC42BPBQ9Y5S2 1711 aa1.82□□□□□ -2.12
SCFD1-218ENST00000556256 A0A1W2PQ67 120 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 ARHGEF35A5YM69 484 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 NKX2-6A6NCS4 301 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 FAM166BA8MTA8 275 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 TOM1O60784 492 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 KLF8O95600 359 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 TMEM50AO95807 157 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 CT62P0C5K7 136 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 KITLGP21583 273 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 SSR1P43307 286 aaKnown RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 GYG1P46976 350 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 FGF8P55075 233 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 PDIA2Q13087 525 aaKnown RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 PSG5Q15238 335 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 IMMTQ16891 758 aaKnown RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 VAX1Q5SQQ9 334 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 CYB5R2Q6BCY4 276 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 TRIM40Q6P9F5 258 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF621Q6ZSS3 439 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF429Q86V71 674 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 PLA2G4DQ86XP0 818 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 ZADH2Q8N4Q0 377 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 OR4F15Q8NGB8 312 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 OR4F6Q8NGB9 312 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 OR1L6Q8NGR2 347 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 OR6X1Q8NH79 312 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 FANK1Q8TC84 345 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 IL22RA2Q969J5 263 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 PLEKHA8Q96JA3 519 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 FAM210BQ96KR6 192 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 TCEANC2Q96MN5 208 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 OR8B4Q96RC9 309 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 SLC25A39Q9BZJ4 359 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 MFFQ9GZY8 342 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 METTL7AQ9H8H3 244 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 ADAP2Q9NPF8 381 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 EXD2Q9NVH0 621 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 SPATA7Q9P0W8 599 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 TRAPPC4Q9Y296 219 aa1.81□□□□□ -2.12
SCFD1-218ENST00000556256 PHF3Q92576 2039 aaKnown RBP1.81□□□□□ -2.12
SCFD1-218ENST00000556256 RLFQ13129 1914 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 PEX7O00628 323 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 CA11O75493 328 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 NDUFB10O96000 172 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 SERPINA3P01011 423 aa1.8□□□□□ -2.12
SCFD1-218ENST00000556256 PCCAP05165 728 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 UBTFL1P0CB47 393 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-218ENST00000556256 IGHV3-43DP0DP04 118 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms