RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 LPAR3Q9UBY5 353 aa11.03□□□□□ -0.64
HNRNPC-221ENST00000555883 LEF1Q9UJU2 399 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-221ENST00000555883 SLC13A4Q9UKG4 626 aa11.03□□□□□ -0.64
HNRNPC-221ENST00000555883 ANGPT4Q9Y264 503 aa11.03□□□□□ -0.64
HNRNPC-221ENST00000555883 A0A096LPE4 126 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 A0A1W2PPZ6 126 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 MS4A18H0YCH9 400 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 TPST2O60704 377 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 BGLAPP02818 100 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 OR4A8P0C604 315 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 NR4A2P43354 598 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 PUDPQ08623 228 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 OR1Q1Q15612 314 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 MS4A18Q3C1V0 323 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 CYB5R2Q6BCY4 276 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 LINC00114Q6XXX2 140 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 PXKQ7Z7A4 578 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 C20orf196Q8IYI0 205 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 C11orf65Q8NCR3 313 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 DYDC1Q8WWB3 177 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 ANKRD27Q96NW4 1050 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 PIMREGQ9BSJ6 248 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 ZNF385DQ9H6B1 395 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 TRIM33Q9UPN9 1127 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 USP22Q9UPT9 525 aa11.02□□□□□ -0.65
HNRNPC-221ENST00000555883 SVEP1Q4LDE5 3571 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 IGHV2OR16-5A0A0B4J2B6 119 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 HMGB1P1B2RPK0 211 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 CHP2O43745 196 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 NQO1P15559 274 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 CALCRP30988 508 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 GZMKP49863 264 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 IDH3GP51553 393 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 HGFACQ04756 655 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 TTMPQ5BVD1 217 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 SLC46A3Q7Z3Q1 461 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 PTOV1Q86YD1 416 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 ZNF837Q96EG3 531 aaPredicted RBP11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 ARHGDIGQ99819 225 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 PCDHAC1Q9H158 963 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 B3GAT2Q9NPZ5 323 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 MRGBPQ9NV56 204 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 INTS9Q9NV88 658 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 NDUFAF1Q9Y375 327 aa11.01□□□□□ -0.65
HNRNPC-221ENST00000555883 SLC35F4A4IF30 521 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 PLPP3O14495 311 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 ENTPD5O75356 428 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 HPRP00739 348 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 ERCC1P07992 297 aaPredicted RBP11□□□□□ -0.65
HNRNPC-221ENST00000555883 VIMP08670 466 aaKnown RBP11□□□□□ -0.65
HNRNPC-221ENST00000555883 NPR2P20594 1047 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 GIFP27352 417 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 EVX1P49640 407 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 CDH12P55289 794 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 TUBA1BP68363 451 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 TUBA4AP68366 448 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 PMS2P3Q13401 168 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 METTL21CQ5VZV1 264 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 TUBA1AQ71U36 451 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 DHDDSQ86SQ9 333 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 PATL1Q86TB9 770 aaKnown RBP11□□□□□ -0.65
HNRNPC-221ENST00000555883 CKAP2Q8WWK9 683 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
HNRNPC-221ENST00000555883 RASSF5Q8WWW0 418 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 MAGEB18Q96M61 343 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 MOGAT1Q96PD6 335 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 KCNK17Q96T54 332 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 CGREF1Q99674 301 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 DOK1Q99704 481 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 PRR14Q9BWN1 585 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 SLC19A3Q9BZV2 496 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 KAT8Q9H7Z6 458 aaKnown RBP11□□□□□ -0.65
HNRNPC-221ENST00000555883 VIPAS39Q9H9C1 493 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 STAB1Q9NY15 2570 aa11□□□□□ -0.65
HNRNPC-221ENST00000555883 ZNF503-AS2A6NEH8 195 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 M0R3G1 203 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 ANGPT2O15123 496 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 LY6HO94772 140 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 CELA3BP08861 270 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 HLA-DOBP13765 273 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 AQP1P29972 269 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 THBS4P35443 961 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 IL1RL1Q01638 556 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 ZP4Q12836 540 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 DUSP7Q16829 419 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 CYP51A1Q16850 503 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 GSG1Q2KHT4 349 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 PHYHD1Q5SRE7 291 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 INTS11Q5TA45 600 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 MDP1Q86V88 176 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 MYPOPQ86VE0 399 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 OR5J2Q8NH18 312 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 MPP4Q96JB8 637 aa10.99□□□□□ -0.65
HNRNPC-221ENST00000555883 ZNF75AQ96N20 296 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms