RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PIK3C3Q8NEB9 887 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 TMEM171Q8WVE6 324 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 GSX2Q9BZM3 304 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 POLR2J2Q9GZM3 115 aaKnown RBP17.93■□□□□ 0.46
VTI1B-205ENST00000555543 POLR2J3Q9H1A7 115 aaKnown RBP17.93■□□□□ 0.46
VTI1B-205ENST00000555543 GPR35Q9HC97 309 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 NANSQ9NR45 359 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 DLL4Q9NR61 685 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 TAS2R5Q9NYW4 299 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 MAGED1Q9Y5V3 778 aaPredicted RBP17.93■□□□□ 0.46
VTI1B-205ENST00000555543 SNX13Q9Y5W8 968 aa17.93■□□□□ 0.46
VTI1B-205ENST00000555543 A0A096LPE4 126 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 A0A1W2PPZ6 126 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 SLC35F4A4IF30 521 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 ASAH2BP0C7U1 165 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 PRPS1P60891 318 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 TUBA1BP68363 451 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 TUBA4AP68366 448 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 ARF1P84077 181 aaKnown RBP17.92■□□□□ 0.46
VTI1B-205ENST00000555543 CEACAM16Q2WEN9 425 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 KLHL24Q6TFL4 600 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 B3GLCTQ6Y288 498 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 TUBA1AQ71U36 451 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 PXKQ7Z7A4 578 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 PIGWQ7Z7B1 504 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 C20orf196Q8IYI0 205 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 GPR137CQ8N3F9 429 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 SMAP2Q8WU79 429 aaPredicted RBP17.92■□□□□ 0.46
VTI1B-205ENST00000555543 CRLF2Q9HC73 371 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 C20orf141Q9NUB4 165 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 CISD1Q9NZ45 108 aaKnown RBP17.92■□□□□ 0.46
VTI1B-205ENST00000555543 ZNF229Q9UJW7 825 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 A4GNTQ9UNA3 340 aa17.92■□□□□ 0.46
VTI1B-205ENST00000555543 M0R3G1 203 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 GSTA4O15217 222 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 ZNF682O95780 498 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 NCK1P16333 377 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 RBM34P42696 430 aaKnown RBP17.91■□□□□ 0.46
VTI1B-205ENST00000555543 SH3BGRP55822 239 aaPredicted RBP17.91■□□□□ 0.46
VTI1B-205ENST00000555543 CAMK2DQ13557 499 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 SHEQ5VZ18 495 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 ANKRD16Q6P6B7 361 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 SLC22A25Q6T423 547 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 ANKK1Q8NFD2 765 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 TMEM239Q8WW34 195 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 KCTD14Q9BQ13 255 aaPredicted RBP17.91■□□□□ 0.46
VTI1B-205ENST00000555543 CXorf56Q9H5V9 222 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 ZNF701Q9NV72 531 aaPredicted RBP17.91■□□□□ 0.46
VTI1B-205ENST00000555543 MGAT4BQ9UQ53 548 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 NF1P21359 2839 aa17.91■□□□□ 0.46
VTI1B-205ENST00000555543 ARPC4-TTLL3A0A0A6YYG9 625 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 E7EQL1 145 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 J3KTA2 159 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 PIP5K1CO60331 668 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 SEC14L2O76054 403 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 WNT11O96014 354 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 SERPINA1P01009 418 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 CD8AP01732 235 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 MT-ND1P03886 318 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 UMPSP11172 480 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 IFNGR1P15260 489 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 PAX1P15863 534 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 YAP1P46937 504 aaKnown RBP17.9■□□□□ 0.46
VTI1B-205ENST00000555543 RPS4XP62701 263 aaKnown RBP17.9■□□□□ 0.46
VTI1B-205ENST00000555543 LSM11P83369 360 aaKnown RBP eCLIP17.9■□□□□ 0.46
VTI1B-205ENST00000555543 ZP4Q12836 540 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 CBLL1Q75N03 491 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 RBM15BQ8NDT2 890 aaKnown RBP17.9■□□□□ 0.46
VTI1B-205ENST00000555543 MAGEE2Q8TD90 523 aaPredicted RBP17.9■□□□□ 0.46
VTI1B-205ENST00000555543 LZICQ8WZA0 190 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 RADILQ96JH8 1075 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 HSH2DQ96JZ2 352 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 PRRC1Q96M27 445 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 OBP2BQ9NPH6 170 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 ARL2BPQ9Y2Y0 163 aa17.9■□□□□ 0.46
VTI1B-205ENST00000555543 SETD2Q9BYW2 2564 aaPredicted RBP17.9■□□□□ 0.46
VTI1B-205ENST00000555543 IGHV1-18A0A0C4DH31 117 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 ZNF503-AS2A6NEH8 195 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 OVOL3O00110 214 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 ARHGEF9O43307 516 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 OR7A10O76100 309 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 OR6A2O95222 327 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 THRBP10828 461 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 BIDP55957 195 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 MELKQ14680 651 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 C1QTNF12Q5T7M4 302 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 SLC35D2Q76EJ3 337 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 NANOGNBQ7Z5D8 188 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 YTHDF3Q7Z739 585 aaKnown RBP17.89■□□□□ 0.45
VTI1B-205ENST00000555543 RNF148Q8N7C7 305 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 LRR1Q96L50 414 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 TRAF4Q9BUZ4 470 aaPredicted RBP17.89■□□□□ 0.45
VTI1B-205ENST00000555543 SPAG4Q9NPE6 437 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 MAN2C1Q9NTJ4 1040 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 ARL8BQ9NVJ2 186 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 RHCGQ9UBD6 479 aa17.89■□□□□ 0.45
VTI1B-205ENST00000555543 ATP6V1G2-DDX39BF2Z307 99 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 NDUFAB1O14561 156 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 FFAR1O14842 300 aa17.88■□□□□ 0.45
VTI1B-205ENST00000555543 RNF13O43567 381 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms