RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ST3GAL4Q11206 333 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ETFDHQ16134 617 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 GTF2IRD2BQ6EKJ0 949 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 USP51Q70EK9 711 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 TRILQ7L0X0 811 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 P4HA3Q7Z4N8 544 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 GTF2IRD2Q86UP8 949 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 SLC37A3Q8NCC5 494 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 MFSD8Q8NHS3 518 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ABHD3Q8WU67 409 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 TAAR6Q96RI8 345 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ASB6Q9NWX5 421 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 ZNF229Q9UJW7 825 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 BLOC1S6Q9UL45 172 aa9.14□□□□□ -0.95
NEK9-205ENST00000555405 IGLV3-32A0A0A0MS00 114 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 SURF4O15260 269 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 KRT33AO76009 404 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 FMODQ06828 376 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 GCNT2Q8N0V5 402 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 FAM109AQ8N4B1 249 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 MEIOBQ8N635 442 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 RBMXL3Q8N7X1 1067 aaKnown RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 OR10H4Q8NGA5 316 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 APH1BQ8WW43 257 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 NR1H4Q96RI1 486 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 NDEL1Q9GZM8 345 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 MS4A18H0YCH9 400 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 BHLHE40O14503 412 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 MAGEB4O15481 346 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 NPIPB7O75200 414 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 SEC14L2O76054 403 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 SYNGR4O95473 234 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 SLC35A1P78382 337 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 MS4A18Q3C1V0 323 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 CD300LDQ6UXZ3 194 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 DPY19L2P2Q6ZN68 376 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 ZFP62Q8NB50 900 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 OR2V1Q8NHB1 315 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 TMEM163Q8TC26 289 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 SLC25A43Q8WUT9 341 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 RNF138Q8WVD3 245 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 FRMD6Q96NE9 622 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 ZNF582Q96NG8 517 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 TSPAN32Q96QS1 320 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 ING1Q9UK53 422 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 SLC35F4A4IF30 521 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 OR6C68A6NDL8 312 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 H3BSH0 61 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 ZNF208O43345 1280 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 MT-ATP6P00846 226 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 MT-ND2P03891 347 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 PSMB9P28065 219 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 CSNK2A1P68400 391 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 SIRPAP78324 504 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 LGALS3BPQ08380 585 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 LAIR2Q6ISS4 152 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 ARHGAP11AQ6P4F7 1023 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 C9orf43Q8TAL5 461 aaPredicted RBP9.13□□□□□ -0.95
NEK9-205ENST00000555405 GGHQ92820 318 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 RNFT2Q96EX2 444 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 Q96MT0 163 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 POTEKPQ9BYX7 375 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 NUAK2Q9H093 628 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 C12orf49Q9H741 205 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 HIF3AQ9Y2N7 669 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 HDGFL3Q9Y3E1 203 aa9.13□□□□□ -0.95
NEK9-205ENST00000555405 GJE1A6NN92 205 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 M0R3G1 203 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 RENP00797 406 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 ADH6P28332 368 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 MFSD13AQ14CX5 517 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PRR30Q53SZ7 412 aaPredicted RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 C12orf73Q69YU5 71 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 NIPAL3Q6P499 406 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PAQR6Q6TCH4 344 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 UBE2J2Q8N2K1 259 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 LNX2Q8N448 690 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PTP4A1Q93096 173 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 ZNF385AQ96PM9 386 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 PITX2Q99697 317 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 NAA11Q9BSU3 229 aaPredicted RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 CHCHD3Q9NX63 227 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 CORINQ9Y5Q5 1042 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 NCKAP5O14513 1909 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 DCTN6O00399 190 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 CRHBPP24387 322 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 CLRN1P58418 232 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 RASGEF1BQ0VAM2 473 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 IL18R1Q13478 541 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 MED22Q15528 200 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 PDSS1Q5T2R2 415 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 ERI1Q8IV48 349 aaKnown RBP9.12□□□□□ -0.95
NEK9-205ENST00000555405 TRIB1Q96RU8 372 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 C12orf10Q9HB07 376 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 POLR1DQ9Y2S0 133 aa9.12□□□□□ -0.95
NEK9-205ENST00000555405 EXPH5Q8NEV8 1989 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms