RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SCAIQ8N9R8 606 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CCDC197Q8NCU1 140 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 PIK3C3Q8NEB9 887 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 IL17RDQ8NFM7 739 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 NFKBIDQ8NI38 313 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 NANOS1Q8WY41 292 aaKnown RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 SLC25A36Q96CQ1 311 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 KTI12Q96EK9 354 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 SLC47A1Q96FL8 570 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 THOC1Q96FV9 657 aaKnown RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 LRR1Q96L50 414 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF607Q96SK3 696 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 EPYCQ99645 322 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 TMEM43Q9BTV4 400 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 FAM107BQ9H098 131 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 NELFAQ9H3P2 528 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 PLK3Q9H4B4 646 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF442Q9H7R0 627 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 YAE1D1Q9NRH1 226 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CA10Q9NS85 328 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 VAPAQ9P0L0 249 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 LPAR3Q9UBY5 353 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 CDC42EP3Q9UKI2 254 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 MOKQ9UQ07 419 aa5.75□□□□□ -1.49
SLIRP-203ENST00000554074 ANK3Q12955 4377 aaKnown RBP5.75□□□□□ -1.49
SLIRP-203ENST00000554074 WNK2Q9Y3S1 2297 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 IGKV1D-42A0A075B6H8 117 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 A0A087WUJ7 227 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 A0A0B4J2E0 115 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 A0A1B0GX12 115 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 LOC390937A0A1W2PQ73 354 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 VSTM5A8MXK1 200 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF99A8MXY4 864 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 M0R082 166 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 NR5A2O00482 541 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 TPST1O60507 370 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 C8BP07358 591 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 FAM157CP0CG43 387 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 USF1P22415 310 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SLC6A2P23975 617 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 GRPRP30550 384 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ARR3P36575 388 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 GZMKP49863 264 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 PCBP3P57721 371 aaKnown RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 NCALDP61601 193 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 LSM11P83369 360 aaKnown RBP eCLIP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 HOXC5Q00444 222 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 POU3F1Q03052 451 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 LGALS3BPQ08380 585 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 RBBP4Q09028 425 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 C1DQ13901 141 aaKnown RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SCARB2Q14108 478 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 KRT72Q14CN4 511 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ADIPOQQ15848 244 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ADRM1Q16186 407 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 TRMT5Q32P41 509 aaKnown RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 MMEL1Q495T6 779 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SPATS1Q496A3 300 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 PAGE3Q5JUK9 113 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 CYB5R2Q6BCY4 276 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 DLEU7Q6UYE1 221 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 NHLRC1Q6VVB1 395 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 HACD2Q6Y1H2 254 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 COMTD1Q86VU5 262 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 RANBP3LQ86VV4 465 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 LSRQ86X29 649 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SNX32Q86XE0 403 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SLC30A8Q8IWU4 369 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 UEVLDQ8IX04 471 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 C20orf196Q8IYI0 205 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 TMEM123Q8N131 208 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 C10orf111Q8N326 155 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 GPR137CQ8N3F9 429 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF540Q8NDQ6 660 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 HIPK4Q8NE63 616 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 OR8J3Q8NGG0 315 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF417Q8TAU3 575 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 BCAS4Q8TDM0 211 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 TAAR8Q969N4 342 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 FBXO17Q96EF6 278 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ANKRD27Q96NW4 1050 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SORCS2Q96PQ0 1159 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 OR2M2Q96R28 347 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF587Q96SQ5 575 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 HOPXQ9BPY8 73 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 CPPED1Q9BRF8 314 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 PIMREGQ9BSJ6 248 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 DENND2DQ9H6A0 471 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 EFCAB1Q9HAE3 211 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 TMEM27Q9HBJ8 222 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 CRLF2Q9HC73 371 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 GPR35Q9HC97 309 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 NDE1Q9NXR1 346 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 MRPL39Q9NYK5 338 aaKnown RBP5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SELENONQ9NZV5 590 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SLAMF8Q9P0V8 285 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 SLC13A4Q9UKG4 626 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 USP22Q9UPT9 525 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 ANGPT4Q9Y264 503 aa5.74□□□□□ -1.49
SLIRP-203ENST00000554074 NOX1Q9Y5S8 564 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms