RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ZNF300Q96RE9 604 aaPredicted RBP7.81□□□□□ -1.16
TDP1-208ENST00000553989 APOL4Q9BPW4 351 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 PSD2Q9BQI7 771 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 TRAF4Q9BUZ4 470 aaPredicted RBP7.81□□□□□ -1.16
TDP1-208ENST00000553989 CACNG6Q9BXT2 260 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 ACTRT3Q9BYD9 372 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 PAIP1Q9H074 479 aaKnown RBP7.81□□□□□ -1.16
TDP1-208ENST00000553989 PIGUQ9H490 435 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 TOR3AQ9H497 397 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 CXorf36Q9H7Y0 433 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 CCNB1IP1Q9NPC3 277 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 SIRT3Q9NTG7 399 aaPredicted RBP7.81□□□□□ -1.16
TDP1-208ENST00000553989 VAPAQ9P0L0 249 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 NTMQ9P121 344 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 ICAM5Q9UMF0 924 aa7.81□□□□□ -1.16
TDP1-208ENST00000553989 SHISA9B4DS77 424 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 ZNF264O43296 627 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 EFNA2O43921 213 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 C6orf47O95873 294 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 IGHV3-9P01782 118 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 TFPIP10646 304 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 RANBP1P43487 201 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 OR3A2P47893 321 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 SERPINB10P48595 397 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 ATP12AP54707 1039 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 RAC3P60763 192 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 ISL1P61371 349 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 MVKQ03426 396 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 CHRNEQ04844 493 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 RAB35Q15286 201 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 ZIK1Q3SY52 487 aaPredicted RBP7.8□□□□□ -1.16
TDP1-208ENST00000553989 KLHL26Q53HC5 615 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 SPANXN4Q5MJ08 99 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 TIMM23BQ5SRD1 257 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.8□□□□□ -1.16
TDP1-208ENST00000553989 KLHL17Q6TDP4 642 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 SSX8Q7RTT4 187 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 GALNT5Q7Z7M9 940 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 TSPYL5Q86VY4 417 aaPredicted RBP7.8□□□□□ -1.16
TDP1-208ENST00000553989 ANKRD13BQ86YJ7 626 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 FBXL14Q8N1E6 418 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 SVOPQ8N4V2 548 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 OR5W2Q8NH69 310 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 OR5AK3PQ8NH89 298 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 GPR119Q8TDV5 335 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 FBLIM1Q8WUP2 373 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 IPCEF1Q8WWN9 437 aaPredicted RBP7.8□□□□□ -1.16
TDP1-208ENST00000553989 S100ZQ8WXG8 99 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 HTRA1Q92743 480 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 FCRL1Q96LA6 429 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 GABARAPL1Q9H0R8 117 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 RAD21L1Q9H4I0 556 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 PIF1Q9H611 641 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 BCO1Q9HAY6 547 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 SERINC1Q9NRX5 453 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 ATAD3AQ9NVI7 634 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 EMC3Q9P0I2 261 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 B3GALT5Q9Y2C3 310 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 ZANQ9Y493 2812 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 PRR14LQ5THK1 2151 aa7.8□□□□□ -1.16
TDP1-208ENST00000553989 COL6A5A8TX70 2615 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 ATRQ13535 2644 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 ABCA1O95477 2261 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 IGHV4-30-2A0A087WSY4 118 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 A0A1W2PR80 420 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 ZNF99A8MXY4 864 aaPredicted RBP7.79□□□□□ -1.16
TDP1-208ENST00000553989 M0R1B8 84 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 SULT2B1O00204 365 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 RFXANKO14593 260 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 SMAD9O15198 467 aaKnown RBP7.79□□□□□ -1.16
TDP1-208ENST00000553989 PHF1O43189 567 aaPredicted RBP7.79□□□□□ -1.16
TDP1-208ENST00000553989 GPRIN2O60269 458 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 EIF4E2O60573 245 aaKnown RBP7.79□□□□□ -1.16
TDP1-208ENST00000553989 CYTIPO60759 359 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 CLPXO76031 633 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 CD8AP01732 235 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 LAMP1P11279 417 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 GPX2P18283 190 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 IGHV1-2P23083 117 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 MAGEA2P43356 314 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 ZNF83P51522 516 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 CASP9P55211 416 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 CSNK2A1P68400 391 aaPredicted RBP7.79□□□□□ -1.16
TDP1-208ENST00000553989 CDK5R2Q13319 367 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 TMED1Q13445 227 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 SELPLGQ14242 412 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 ZNF846Q147U1 533 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 MLC1Q15049 377 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 GPR68Q15743 365 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 NEDD8Q15843 81 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 PGS1Q32NB8 556 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 PDZK1Q5T2W1 519 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 ZNF691Q5VV52 312 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 OR2T5Q6IEZ7 315 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 C16orf87Q6PH81 154 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 BHLHB9Q6PI77 547 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 TMEM108Q6UXF1 575 aa7.79□□□□□ -1.16
TDP1-208ENST00000553989 EIF3MQ7L2H7 374 aaKnown RBP7.79□□□□□ -1.16
TDP1-208ENST00000553989 ZNF554Q86TJ5 538 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms