RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SNTNA6NMZ2 147 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 LRRN3E7EW58 273 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 H3BML4 177 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 BLOC1S5-TXNDC5H3BN57 136 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 IDH3BO43837 385 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 IFNGP01579 166 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 HPNP05981 417 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 LYNP07948 512 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 PCSK6P29122 969 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 NOS3P29474 1203 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 MYBPC1Q00872 1141 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 RBPJQ06330 500 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 PMS2P3Q13401 168 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 SGCBQ16585 318 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 ALG10Q5BKT4 473 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 MEDAGQ5VYS4 303 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 ACSM5Q6NUN0 579 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 C3P1Q6ZMU1 363 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 CCDC71Q8IV32 467 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-208ENST00000553868 IQCF1Q8N6M8 205 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 LRRC17Q8N6Y2 441 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 FAM83FQ8NEG4 500 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-208ENST00000553868 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 GPX7Q96SL4 187 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-208ENST00000553868 NPAS1Q99742 590 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 TTTY12Q9BZ98 90 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF696Q9H7X3 374 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-208ENST00000553868 RASSF1Q9NS23 344 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 TRAPPC4Q9Y296 219 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 TPRKBQ9Y3C4 175 aa12.95□□□□□ -0.34
SHMT2-208ENST00000553868 SH3D21A4FU49 640 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 LIPT2A6NK58 231 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 RIIAD1A6NNX1 92 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 BHLHE40O14503 412 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 GLSO94925 669 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 RFPL3SP0C7P2 107 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 PEPDP12955 493 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 APEHP13798 732 aaKnown RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 IGFBP2P18065 325 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 GRPRP30550 384 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 UQCRC1P31930 480 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 PPIAP62937 165 aaKnown RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 CSNK2A1P68400 391 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 SLC35A1P78382 337 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 MYBPHQ13203 477 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 OR7A5Q15622 319 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 CTU2Q2VPK5 515 aaKnown RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 SLC25A30Q5SVS4 291 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 H1FNTQ75WM6 255 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 YRDCQ86U90 279 aaKnown RBP12.94□□□□□ -0.34
SHMT2-208ENST00000553868 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 TCEANCQ8N8B7 351 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 ADPRHL1Q8NDY3 354 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 OR5M1Q8NGP8 315 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 OR4Q3Q8NH05 313 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 NINJ1Q92982 152 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF566Q969W8 418 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 ZHX1-C8orf76Q96EF9 292 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 OR5B2Q96R09 309 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 FN3KQ9H479 309 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 ZNF226Q9NYT6 803 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 KLHL21Q9UJP4 597 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 B3GALT5Q9Y2C3 310 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 PLEKHA6Q9Y2H5 1048 aa12.94□□□□□ -0.34
SHMT2-208ENST00000553868 FTCDNL1E5RQL4 147 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 M0R082 166 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 IMPA2O14732 288 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 ARPC3O15145 178 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 SURF4O15260 269 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 DNPH1O43598 174 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 EFNA2O43921 213 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 FZD7O75084 574 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 PMS2P2O95744 297 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 CD14P08571 375 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 IL11P20809 199 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 PAICSP22234 425 aaKnown RBP12.93□□□□□ -0.34
SHMT2-208ENST00000553868 SFTPDP35247 375 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 AQP2P41181 271 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 OR2B6P58173 313 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 GABARAPL2P60520 117 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 RPL18Q07020 188 aaKnown RBP12.93□□□□□ -0.34
SHMT2-208ENST00000553868 FHL1Q13642 323 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 OCLNQ16625 522 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 EMC4Q5J8M3 183 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-208ENST00000553868 TMEM201Q5SNT2 666 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 PDSS1Q5T2R2 415 aa12.93□□□□□ -0.34
SHMT2-208ENST00000553868 GPR139Q6DWJ6 353 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms