RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZNF587BE7ETH6 402 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 KPNA4O00629 521 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 TPST2O60704 377 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 NPIPB7O75200 414 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 SLC43A1O75387 559 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 CTAG2O75638 210 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 IGHV3-9P01782 118 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ITGA2P17301 1181 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 TCN1P20061 433 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 KLK2P20151 261 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 TNFRSF1BP20333 461 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 RBM34P42696 430 aaKnown RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 OR1E2P47887 323 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 SLC25A3Q00325 362 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 FAPQ12884 760 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 FOXD4Q12950 439 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 BEX5Q5H9J7 111 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 OR7E24Q6IFN5 339 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 HMBOX1Q6NT76 420 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 C8orf82Q6P1X6 216 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 NIPAL3Q6P499 406 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 NANOGNBQ7Z5D8 188 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 COMTD1Q86VU5 262 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 P2RY8Q86VZ1 359 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 RBM45Q8IUH3 476 aaKnown RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 P3H2Q8IVL5 708 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 DEFB107AQ8IZN7 70 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 GABRG1Q8N1C3 465 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ARHGAP24Q8N264 748 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ADPRHL1Q8NDY3 354 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 S100PBPQ96BU1 408 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 PIK3IP1Q96FE7 263 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 PRRC1Q96M27 445 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 NSMCE2Q96MF7 247 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 CDRT15Q96T59 188 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 PCDHAC1Q9H158 963 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 SLCO5A1Q9H2Y9 848 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ESRP2Q9H6T0 727 aaKnown RBP7.37□□□□□ -1.23
PSEN1-209ENST00000553855 IFT22Q9H7X7 185 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 FKRPQ9H9S5 495 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 NANSQ9NR45 359 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ARL8BQ9NVJ2 186 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 TAS2R16Q9NYV7 291 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 PRSS50Q9UI38 385 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 RIMS3Q9UJD0 308 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 USP22Q9UPT9 525 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 MED31Q9Y3C7 131 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 NOX1Q9Y5S8 564 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 DOCK7Q96N67 2140 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 ABCA12Q86UK0 2595 aa7.37□□□□□ -1.23
PSEN1-209ENST00000553855 PCNX3Q9H6A9 2034 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF814B7Z6K7 855 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 FTCDNL1E5RQL4 147 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 RNF13O43567 381 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 SHOX2O60902 331 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-209ENST00000553855 ENTPD5O75356 428 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 SERPINI2O75830 405 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 LYZL6O75951 148 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 CH25HO95992 272 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 WNT11O96014 354 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 ADORA3P0DMS8 318 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 NCK1P16333 377 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 CRYGSP22914 178 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 PAX7P23759 505 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 DNASE1P24855 282 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 CLDN17P56750 224 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 SMIM11AP58511 58 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 EGR4Q05215 589 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 PUDPQ08623 228 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 PIN1Q13526 163 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-209ENST00000553855 TRAM2Q15035 370 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 PPA1Q15181 289 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 KLHL17Q6TDP4 642 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 CREB3L2Q70SY1 520 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 HDDC2Q7Z4H3 204 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 GPR137CQ8N3F9 429 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 FITM2Q8N6M3 262 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 RNF148Q8N7C7 305 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 PIK3C3Q8NEB9 887 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 OR5J2Q8NH18 312 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 TMEM239Q8WW34 195 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 POP5Q969H6 163 aaKnown RBP7.36□□□□□ -1.23
PSEN1-209ENST00000553855 SGTBQ96EQ0 304 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 LRGUKQ96M69 825 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 PTDSS2Q9BVG9 487 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 MRPL39Q9NYK5 338 aaKnown RBP7.36□□□□□ -1.23
PSEN1-209ENST00000553855 MALT1Q9UDY8 824 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 ZNF229Q9UJW7 825 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 ING1Q9UK53 422 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-209ENST00000553855 ITGB1BP2Q9UKP3 347 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 RCE1Q9Y256 329 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 MAGED1Q9Y5V3 778 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-209ENST00000553855 CACNA1CQ13936 2221 aa7.36□□□□□ -1.23
PSEN1-209ENST00000553855 KIAA1549Q9HCM3 1950 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 UTP20O75691 2785 aaKnown RBP7.35□□□□□ -1.23
PSEN1-209ENST00000553855 IGKV1D-42A0A075B6H8 117 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 LOC102725191A0A1B0GVB3 256 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 A0A1W2PRG6 482 aa7.35□□□□□ -1.23
PSEN1-209ENST00000553855 ENO4A6NNW6 628 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms