RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 C11orf98E9PRG8 122 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 SERPINI2O75830 405 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 UMPSP11172 480 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 HSD17B1P14061 328 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 HOXC12P31275 282 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 ZNF83P51522 516 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 ST3GAL3Q11203 375 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 ZP4Q12836 540 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 FOXD4Q12950 439 aaPredicted RBP17.84■□□□□ 0.45
FOXA1-203ENST00000553751 KRT72Q14CN4 511 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 TBRG1Q3YBR2 411 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 PHYHD1Q5SRE7 291 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 C1QTNF12Q5T7M4 302 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 GLYATQ6IB77 296 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 HMBOX1Q6NT76 420 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 FKBP9P1Q75LS8 142 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 NANOGNBQ7Z5D8 188 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 TSEN54Q7Z6J9 526 aaKnown RBP17.84■□□□□ 0.45
FOXA1-203ENST00000553751 C20orf196Q8IYI0 205 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 GPR137CQ8N3F9 429 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 ZNF611Q8N823 705 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 IGFBPL1Q8WX77 278 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 HS6ST2Q96MM7 605 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 NELFAQ9H3P2 528 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 GPR35Q9HC97 309 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 RHCGQ9UBD6 479 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 CD300AQ9UGN4 299 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 RPS6KA6Q9UK32 745 aa17.84■□□□□ 0.45
FOXA1-203ENST00000553751 ABCD4O14678 606 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 PIP5K1CO60331 668 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 OR7A10O76100 309 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 PRSS23O95084 383 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 OR6A2O95222 327 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 TCN1P20061 433 aaPredicted RBP17.83■□□□□ 0.44
FOXA1-203ENST00000553751 SH3BGRP55822 239 aaPredicted RBP17.83■□□□□ 0.44
FOXA1-203ENST00000553751 LSM11P83369 360 aaKnown RBP eCLIP17.83■□□□□ 0.44
FOXA1-203ENST00000553751 CARD17Q5XLA6 110 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 C16orf89Q6UX73 402 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 TMEM108Q6UXF1 575 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 CCDC197Q8NCU1 140 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 LIPHQ8WWY8 451 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 BCL2L2Q92843 193 aaPredicted RBP17.83■□□□□ 0.44
FOXA1-203ENST00000553751 NEUROG1Q92886 237 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 PIGTQ969N2 578 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 ZNF837Q96EG3 531 aaPredicted RBP17.83■□□□□ 0.44
FOXA1-203ENST00000553751 SGTBQ96EQ0 304 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 PIP5K1AQ99755 562 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 CRLF2Q9HC73 371 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 DCAF13Q9NV06 445 aaKnown RBP17.83■□□□□ 0.44
FOXA1-203ENST00000553751 NDE1Q9NXR1 346 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 MED31Q9Y3C7 131 aa17.83■□□□□ 0.44
FOXA1-203ENST00000553751 DSCAMO60469 2012 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 SHISA9B4DS77 424 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 RNF13O43567 381 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 HIST1H2ABP04908 130 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 IFNGR1P15260 489 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 FUT1P19526 365 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 CD40P25942 277 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 IFNA8P32881 189 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 PRPS1P60891 318 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 SPOCK1Q08629 439 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 CEACAM16Q2WEN9 425 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 ZNF672Q499Z4 452 aaPredicted RBP17.82■□□□□ 0.44
FOXA1-203ENST00000553751 SAMD4BQ5PRF9 694 aaKnown RBP17.82■□□□□ 0.44
FOXA1-203ENST00000553751 ANKRD16Q6P6B7 361 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 KLHL17Q6TDP4 642 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 SLC35D2Q76EJ3 337 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 HIST3H2AQ7L7L0 130 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 DEFB107AQ8IZN7 70 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 FAM86B1Q8N7N1 296 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 HIST1H2ACQ93077 130 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 LRR1Q96L50 414 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 CDRT15Q96T59 188 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 FNDC11Q9BVV2 318 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 C1QTNF6Q9BXI9 259 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 GORASP2Q9H8Y8 452 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 OBP2BQ9NPH6 170 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 ADAM21Q9UKJ8 722 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 SAMD4AQ9UPU9 718 aaKnown RBP17.82■□□□□ 0.44
FOXA1-203ENST00000553751 MAGED1Q9Y5V3 778 aaPredicted RBP17.82■□□□□ 0.44
FOXA1-203ENST00000553751 VPS13CQ709C8 3753 aa17.82■□□□□ 0.44
FOXA1-203ENST00000553751 PLCE1Q9P212 2302 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 ARPC4-TTLL3A0A0A6YYG9 625 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 M0R1B8 84 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 M0R3G1 203 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 TSPAN19P0C672 248 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 PTAFRP25105 342 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 BIDP55957 195 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 ARF1P84077 181 aaKnown RBP17.81■□□□□ 0.44
FOXA1-203ENST00000553751 MXRA7P84157 204 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 RPL18Q07020 188 aaKnown RBP17.81■□□□□ 0.44
FOXA1-203ENST00000553751 CAMK2DQ13557 499 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 TRAM2Q15035 370 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 KLHL24Q6TFL4 600 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 MAGEE2Q8TD90 523 aaPredicted RBP17.81■□□□□ 0.44
FOXA1-203ENST00000553751 FBXW5Q969U6 566 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 ADAD1Q96M93 576 aaKnown RBP17.81■□□□□ 0.44
FOXA1-203ENST00000553751 MAGEL2Q9UJ55 1249 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 ENPP4Q9Y6X5 453 aa17.81■□□□□ 0.44
FOXA1-203ENST00000553751 ZNF469Q96JG9 3925 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms