RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 LIPNQ5VXI9 398 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 ATG4DQ86TL0 474 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 LRRTM1Q86UE6 522 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 COMMD7Q86VX2 200 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 GLB1L2Q8IW92 636 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLC35F3Q8IY50 421 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF615Q8N8J6 731 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 C19orf47Q8N9M1 422 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 FOXN4Q96NZ1 517 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 GPX7Q96SL4 187 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 C1QTNF6Q9BXI9 259 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 ULBP3Q9BZM4 244 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 RTN4RQ9BZR6 473 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR10A5Q9H207 317 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 WDR76Q9H967 626 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 NPDC1Q9NQX5 325 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 PTTG3PQ9NZH4 202 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 MGAT4CQ9UBM8 478 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 FKBP7Q9Y680 259 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 ALPK2Q86TB3 2170 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 A0A1B0GUH1 482 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 EFCAB7A8K855 629 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 I3L521 148 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 SHOXO15266 292 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 PRAMEF2O60811 474 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 TGM6O95932 706 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 ALDOBP05062 364 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 IGHV4-34P06331 123 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 FCER2P06734 321 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 RNH1P13489 461 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 GABRG2P18507 467 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 CXCL2P19875 107 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 CSRP1P21291 193 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 LCN1P31025 176 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 NUDT1P36639 197 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 EFNB2P52799 333 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 AP2S1P53680 142 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 MAZP56270 477 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 TSPAN5P62079 268 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 IGLV3-21P80748 117 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 HHEXQ03014 270 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 SKP2Q13309 424 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 GRK1Q15835 563 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 MANEAQ5SRI9 462 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 OLFML2AQ68BL7 652 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 OOSP2Q86WS3 158 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 TMPRSS12Q86WS5 348 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 MCATQ8IVS2 390 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 C10orf53Q8N6V4 93 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 FAM71CQ8NEG0 241 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 C1orf216Q8TAB5 229 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 RELTQ969Z4 430 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 KTI12Q96EK9 354 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 RBM18Q96H35 190 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 LCORQ96JN0 433 aaPredicted RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 DGAT2Q96PD7 388 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 TSPAN32Q96QS1 320 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 LPAR4Q99677 370 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 SEMA6CQ9H3T2 930 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 SRA1Q9HD15 236 aaKnown RBP6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 PRTFDC1Q9NRG1 225 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 HIF3AQ9Y2N7 669 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 PCDH15Q96QU1 1955 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 PCNX3Q9H6A9 2034 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 CACNA1CQ13936 2221 aa6.3□□□□□ -1.4
LINC-ROR-201ENST00000553704 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 FAM221BA6H8Z2 402 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ELOA3DA6NLF2 546 aaPredicted RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 PDCD5O14737 125 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ITGA10O75578 1167 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 PPM1BO75688 479 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 RGS11O94810 467 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 MAS1P04201 325 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 GUSBP08236 651 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 VSIG10L2P0DP72 767 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 AKT2P31751 481 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 CTXN1P60606 82 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 UBE2MP61081 183 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 GUCA2AQ02747 115 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 RPL18Q07020 188 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 IKZF1Q13422 519 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ALKBH1Q13686 389 aaKnown RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 CBFBQ13951 182 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 HYAL4Q2M3T9 481 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 C2orf68Q2NKX9 166 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ELOA3BQ3SY89 546 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 Q499Y3 187 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 KLHL26Q53HC5 615 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ALG10Q5BKT4 473 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 ELFN2Q5R3F8 820 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 YOD1Q5VVQ6 348 aaPredicted RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR5M10Q6IEU7 315 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 GLDNQ6ZMI3 551 aaPredicted RBP6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 CHMP1BQ7LBR1 199 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLC16A9Q7RTY1 509 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 TAF8Q7Z7C8 310 aa6.29□□□□□ -1.4
LINC-ROR-201ENST00000553704 JAZF1Q86VZ6 243 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms