RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 BNIP2Q12982 314 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 PDCD1Q15116 288 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 GSTA3Q16772 222 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 ATAD3BQ5T9A4 648 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 FRRS1Q6ZNA5 592 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 FRMD7Q6ZUT3 714 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 CLEC4FQ8N1N0 589 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 PIK3C3Q8NEB9 887 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 GTF3AQ92664 365 aaKnown RBP11.67□□□□□ -0.54
PRPF39-204ENST00000553605 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 ROPN1LQ96C74 230 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 COQ8BQ96D53 544 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 CCDC126Q96EE4 140 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 ELMOD3Q96FG2 381 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 SLC35G5Q96KT7 338 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-204ENST00000553605 OR51I1Q9H343 314 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 DENND2DQ9H6A0 471 aaPredicted RBP11.67□□□□□ -0.54
PRPF39-204ENST00000553605 CFAP73A6NFT4 308 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 TMEM114B3SHH9 223 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 M0R3G1 203 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 ZSCAN12O43309 604 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 FRS3O43559 492 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 CLPXO76031 633 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 AGR2O95994 175 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 TFPTP0C1Z6 253 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 LINC00032P0C843 101 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF250P15622 560 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 MAKP20794 623 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 LOXL3P58215 753 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 PAX8Q06710 450 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 RAB39AQ14964 217 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 FAM205BPQ63HN1 556 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF813Q6ZN06 617 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 NOA1Q8NC60 698 aaKnown RBP11.66□□□□□ -0.54
PRPF39-204ENST00000553605 SPATA4Q8NEY3 305 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
PRPF39-204ENST00000553605 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 ASH2LQ9UBL3 628 aa11.66□□□□□ -0.54
PRPF39-204ENST00000553605 C5orf63A6NC05 138 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 ERLIN1O75477 346 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 PLATP00750 562 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 MT-ND5P03915 603 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 FAM157BP0CG42 384 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 SLC6A9P48067 706 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 AQP5P55064 265 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 EPS8Q12929 822 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 CAMK2DQ13557 499 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 C1DQ13901 141 aaKnown RBP11.65□□□□□ -0.54
PRPF39-204ENST00000553605 MOGQ16653 247 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 C2orf68Q2NKX9 166 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 CFAP157Q5JU67 520 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 TIFABQ6ZNK6 161 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 MIPOL1Q8TD10 442 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 C11orf40Q8WZ69 217 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 OR2M2Q96R28 347 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 GATA5Q9BWX5 397 aaPredicted RBP11.65□□□□□ -0.54
PRPF39-204ENST00000553605 CHIAQ9BZP6 476 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 TUBB1Q9H4B7 451 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 PRDM13Q9H4Q3 707 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 MARCH7Q9H992 704 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF224Q9NZL3 707 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 FBXL3Q9UKT7 428 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 FIS1Q9Y3D6 152 aa11.65□□□□□ -0.54
PRPF39-204ENST00000553605 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 G3V2L1 256 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 UBOX5O94941 541 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 SERPINA5P05154 406 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 LCKP06239 509 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 CSF1P09603 554 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 SBK2P0C263 348 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 PPIAL4GP0DN37 164 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 PNMTP11086 282 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 CD80P33681 288 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 PROK1P58294 105 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 SEC61A1P61619 476 aaKnown RBP11.64□□□□□ -0.55
PRPF39-204ENST00000553605 C2orf54Q08AI8 447 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 FUT5Q11128 374 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 PTGR1Q14914 329 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 GPAT3Q53EU6 434 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 FAM209AQ5JX71 171 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 RNF165Q6ZSG1 346 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF584Q8IVC4 421 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 BHLHE22Q8NFJ8 381 aaPredicted RBP11.64□□□□□ -0.55
PRPF39-204ENST00000553605 LINC01006Q8NI28 216 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 ZNF519Q8TB69 540 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 SLC25A36Q96CQ1 311 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 OXGR1Q96P68 337 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 RASSF4Q9H2L5 321 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 OR51B6Q9H340 312 aa11.64□□□□□ -0.55
PRPF39-204ENST00000553605 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms