RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 UPB1Q9UBR1 384 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 RPS6KB2Q9UBS0 482 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 TESQ9UGI8 421 aaKnown RBP10.28□□□□□ -0.76
SRP54-203ENST00000553544 ANGPT4Q9Y264 503 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
SRP54-203ENST00000553544 A0A087WUJ7 227 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 A0A0B4J2E0 115 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 LOC102725191A0A1B0GVB3 256 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 A0A1B0GX12 115 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 M0QX08 132 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 FXYD1O00168 92 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 KCNAB3O43448 404 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 OR2T1O43869 369 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 FMO6PO60774 539 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 ZNF432O94892 652 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 MPGP29372 298 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SERPINF1P36955 418 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 RPS5P46782 204 aaKnown RBP10.27□□□□□ -0.77
SRP54-203ENST00000553544 RGS8P57771 180 aaPredicted RBP10.27□□□□□ -0.77
SRP54-203ENST00000553544 SNRPD2P62316 118 aaKnown RBP10.27□□□□□ -0.77
SRP54-203ENST00000553544 TGFBR3Q03167 851 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 NFYCQ13952 458 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 CYLC2Q14093 348 aaPredicted RBP10.27□□□□□ -0.77
SRP54-203ENST00000553544 OR1Q1Q15612 314 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 TRMT5Q32P41 509 aaKnown RBP10.27□□□□□ -0.77
SRP54-203ENST00000553544 FAM69AQ5T7M9 428 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 NANOGP8Q6NSW7 305 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 UGT2A3Q6UWM9 527 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 LINC00114Q6XXX2 140 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SPATA21Q7Z572 469 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SLC30A8Q8IWU4 369 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 C17orf78Q8N4C9 275 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 GPR32P1Q8NGA4 272 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 OR6S1Q8NH40 331 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SLC25A36Q96CQ1 311 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SLC47A1Q96FL8 570 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SORCS2Q96PQ0 1159 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 ARHGDIGQ99819 225 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 NANOGQ9H9S0 305 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SAR1AQ9NR31 198 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SLC17A5Q9NRA2 495 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 B3GAT1Q9P2W7 334 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 SEC14L4Q9UDX3 406 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 AP3M1Q9Y2T2 418 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 AMDHD2Q9Y303 409 aa10.27□□□□□ -0.77
SRP54-203ENST00000553544 TRAV36DV7A0A075B6V5 113 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 PCMT1P22061 227 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 LSP1P33241 339 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 COMPP49747 757 aaPredicted RBP10.26□□□□□ -0.77
SRP54-203ENST00000553544 SELENOPP49908 381 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 CHN2P52757 468 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 CRYBA2P53672 197 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 PRPS1P60891 318 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 SLC25A3Q00325 362 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 KLF10Q13118 480 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 CYP51A1Q16850 503 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 SWT1Q5T5J6 900 aaKnown RBP10.26□□□□□ -0.77
SRP54-203ENST00000553544 LINGO2Q7L985 606 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 SLC46A3Q7Z3Q1 461 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 ARPINQ7Z6K5 226 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 CALHM3Q86XJ0 350 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 KDM8Q8N371 416 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 SMYD1Q8NB12 490 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 OR10A6Q8NH74 314 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 C10orf82Q8WW14 230 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 LRRC58Q96CX6 371 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 SLC41A3Q96GZ6 507 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 OXGR1Q96P68 337 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 SOX7Q9BT81 388 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 LINC00470Q9BZP3 86 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 BPESC1Q9GZL8 116 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 RAB1BQ9H0U4 201 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 TMEM27Q9HBJ8 222 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 GID8Q9NWU2 228 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 MOKQ9UQ07 419 aa10.26□□□□□ -0.77
SRP54-203ENST00000553544 GMNCA6NCL1 334 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 OR6C65A6NJZ3 312 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 B9A039 149 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 ATP6V1G2-DDX39BF2Z307 99 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 MS4A18H0YCH9 400 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 M0R082 166 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 M0R3H8 397 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 NDUFAB1O14561 156 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 AIM2O14862 343 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 VENTXO95231 258 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 STAMBPO95630 424 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 WNT11O96014 354 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 BGLAPP02818 100 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 OPN1SWP03999 348 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 CD247P20963 164 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 GIFP27352 417 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 GRPRP30550 384 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 PCGF2P35227 344 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 CDH12P55289 794 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 NCALDP61601 193 aa10.25□□□□□ -0.77
SRP54-203ENST00000553544 GNGT1P63211 74 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms