RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TWIST2Q8WVJ9 160 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 CNOT9Q92600 299 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 YIPF5Q969M3 257 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 DDIT4LQ96D03 193 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ZG16BQ96DA0 208 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 AURKBQ96GD4 344 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 SLC35G5Q96KT7 338 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ANKRD27Q96NW4 1050 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 LRRC37BQ96QE4 947 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 SLC6A7Q99884 636 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 NAA11Q9BSU3 229 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 C1orf50Q9BV19 199 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 TSPYL1Q9H0U9 437 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 OR51I1Q9H343 314 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 NARFLQ9H6Q4 476 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 MOV10Q9HCE1 1003 aaKnown RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 DYNLRB1Q9NP97 96 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 POLE3Q9NRF9 147 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ATAD3AQ9NVI7 634 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM45AQ9NWC5 275 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 PSMC3IPQ9P2W1 217 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-219ENST00000553488 ASH2LQ9UBL3 628 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 WDR45Q9Y484 360 aa6.24□□□□□ -1.41
ATXN3-219ENST00000553488 A0A1W2PPM1 405 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 DUXAA6NLW8 204 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 TMEM114B3SHH9 223 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 RPL36A-HNRNPH2H7BZ11 118 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 FAAHO00519 579 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 RIPK2O43353 540 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 FRS3O43559 492 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 LYPLA1O75608 230 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 RP2O75695 350 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 GPIP06744 558 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 CHRNGP07510 517 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 CBR1P16152 277 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 CREB1P16220 341 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 RPS4Y1P22090 263 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 ACHEP22303 614 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 COL8A2P25067 703 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 TACR3P29371 465 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 GPR6P46095 362 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 IDH2P48735 452 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 SH3BGRP55822 239 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 UBE2NP61088 152 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 UBA52P62987 128 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 KCNJ10P78508 379 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 CEACAM7Q14002 265 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 CCDC153Q494R4 210 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 SLC9B1Q4ZJI4 515 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 CREB3L2Q70SY1 520 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 C16orf62Q7Z3J2 963 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 EPHX4Q8IUS5 362 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 C10orf107Q8IVU9 208 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 ARFGAP2Q8N6H7 521 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 LRRC17Q8N6Y2 441 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 NOA1Q8NC60 698 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 OR51F2Q8NH61 342 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 PMM1Q92871 262 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 MRPL24Q96A35 216 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 ROPN1LQ96C74 230 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 C3orf30Q96M34 536 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 DUSP26Q9BV47 211 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 GATA5Q9BWX5 397 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 MRPL37Q9BZE1 423 aaKnown RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 LINC00470Q9BZP3 86 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF275Q9NSD4 429 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-219ENST00000553488 TREM2Q9NZC2 230 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 DCDC2Q9UHG0 476 aa6.23□□□□□ -1.41
ATXN3-219ENST00000553488 SH3PXD2BA1X283 911 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 OR6C65A6NJZ3 312 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 M0R233 179 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 CFLARO15519 480 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 SYNGR3O43761 229 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 SCN2BO60939 215 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 FZD7O75084 574 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 PEX11AO75192 247 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 NPIPB7O75200 414 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 PEX14O75381 377 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 SKAP2O75563 359 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 ZNF432O94892 652 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 CHEK2O96017 543 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 C1QCP02747 245 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 FGF4P08620 206 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 FAM153BP0C7A2 387 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 OR12D1P0DN82 309 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 HKR1P10072 659 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 CPA3P15088 417 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 PRPS1L1P21108 318 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 NR4A1P22736 598 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 CASQ1P31415 396 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 ARRB2P32121 409 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 EVX1P49640 407 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 MAP2K6P52564 334 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 MRPS11P82912 194 aaKnown RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 ROR2Q01974 943 aaKnown RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 CKAP4Q07065 602 aaKnown RBP6.22□□□□□ -1.41
ATXN3-219ENST00000553488 EPS8Q12929 822 aa6.22□□□□□ -1.41
ATXN3-219ENST00000553488 NPRL3Q12980 569 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms