RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 GGTLC2Q14390 218 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 EFNB3Q15768 340 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 CYP51A1Q16850 503 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 MST1LQ2TV78 715 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 IQCCQ4KMZ1 466 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
LINC00643-202ENST00000553426 CARD17Q5XLA6 110 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 C11orf65Q8NCR3 313 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 LRR1Q96L50 414 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 SORCS2Q96PQ0 1159 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 OR2M2Q96R28 347 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 SHARPINQ9H0F6 387 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF442Q9H7R0 627 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 INTS9Q9NV88 658 aaKnown RBP11.08□□□□□ -0.64
LINC00643-202ENST00000553426 KLHL14Q9P2G3 628 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.64
LINC00643-202ENST00000553426 POFUT2Q9Y2G5 429 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 NDUFAF1Q9Y375 327 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 NOX1Q9Y5S8 564 aa11.08□□□□□ -0.64
LINC00643-202ENST00000553426 IGKV1D-42A0A075B6H8 117 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 TRBV5-3A0A0A0MS03 114 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 TRAF3IP2O43734 574 aaPredicted RBP11.07□□□□□ -0.64
LINC00643-202ENST00000553426 MT-ATP6P00846 226 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 PUDPQ08623 228 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 ADIPOQQ15848 244 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 GLIPR1L2Q4G1C9 344 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 SLC30A8Q8IWU4 369 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 TMEM123Q8N131 208 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 C10orf111Q8N326 155 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 OR6N1Q8NGY5 312 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 SLC41A3Q96GZ6 507 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 TMEM43Q9BTV4 400 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 NELFAQ9H3P2 528 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 PLK3Q9H4B4 646 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 SLC52A3Q9NQ40 469 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 MRPL39Q9NYK5 338 aaKnown RBP11.07□□□□□ -0.64
LINC00643-202ENST00000553426 KCNS2Q9ULS6 477 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 SPEF1Q9Y4P9 236 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 MXRA5Q9NR99 2828 aa11.07□□□□□ -0.64
LINC00643-202ENST00000553426 IGHV2OR16-5A0A0B4J2B6 119 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 SLC35F4A4IF30 521 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 MS4A18H0YCH9 400 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 hCG_2039718K7EN88 272 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 LMX1BO60663 402 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 FMO6PO60774 539 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ENTPD5O75356 428 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 SERPINI2O75830 405 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 MFN2O95140 757 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 BGLAPP02818 100 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 C8BP07358 591 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 CD79AP11912 226 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 APEHP13798 732 aaKnown RBP11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF16P17020 682 aaPredicted RBP11.06□□□□□ -0.64
LINC00643-202ENST00000553426 CALCRP30988 508 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 LSP1P33241 339 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 NR4A2P43354 598 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 CDH12P55289 794 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 DAG1Q14118 895 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ADRM1Q16186 407 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 GSG1Q2KHT4 349 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 MS4A18Q3C1V0 323 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 RUNDC3AQ59EK9 446 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF613Q6PF04 617 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 DLEU7Q6UYE1 221 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ZNF813Q6ZN06 617 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 SPATA21Q7Z572 469 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 PXKQ7Z7A4 578 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 DHDDSQ86SQ9 333 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 MDP1Q86V88 176 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 COMTD1Q86VU5 262 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 C20orf196Q8IYI0 205 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ANKS4BQ8N8V4 417 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 SMYD1Q8NB12 490 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 SLC26A7Q8TE54 656 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 NEU4Q8WWR8 484 aaPredicted RBP11.06□□□□□ -0.64
LINC00643-202ENST00000553426 MCHR1Q99705 422 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 EMC6Q9BV81 110 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 ULBP2Q9BZM5 246 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 IKZF5Q9H5V7 419 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 DYNLRB1Q9NP97 96 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 FBXL3Q9UKT7 428 aa11.06□□□□□ -0.64
LINC00643-202ENST00000553426 LOC100289279A0A1B0GTE1 492 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 HMGB1P1B2RPK0 211 aaPredicted RBP11.05□□□□□ -0.64
LINC00643-202ENST00000553426 VWC2LB2RUY7 222 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 M0QX08 132 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CHP2O43745 196 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 SEC14L2O76054 403 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 RAB36O95755 333 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 HPRP00739 348 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CELA3BP08861 270 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 ADORA3P0DMS8 318 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 IGHV4-31P0DP07 118 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 HLA-DOBP13765 273 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 HNF1AP20823 631 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 THBS4P35443 961 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 CSNK1A1P48729 337 aa11.05□□□□□ -0.64
LINC00643-202ENST00000553426 GALK2Q01415 458 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms