RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 HOXC5Q00444 222 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 DEFA6Q01524 100 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 MVKQ03426 396 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 TRMT5Q32P41 509 aaKnown RBP7.77□□□□□ -1.17
SYNE2-209ENST00000553308 GKAP1Q5VSY0 366 aaPredicted RBP7.77□□□□□ -1.17
SYNE2-209ENST00000553308 RNF220Q5VTB9 566 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 REP15Q6BDI9 236 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF813Q6ZN06 617 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF621Q6ZSS3 439 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 WDFY1Q8IWB7 410 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 TRIML2Q8N7C3 387 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 C22orf15Q8WYQ4 148 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 EMC6Q9BV81 110 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF747Q9BV97 191 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF416Q9BWM5 594 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF665Q9H7R5 613 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF696Q9H7X3 374 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 SLC6A13Q9NSD5 602 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF224Q9NZL3 707 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 P2RX2Q9UBL9 471 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 DUSP13Q9UII6 198 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 A0A0G2JMP0 313 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 A0A0X1KG70 313 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 AIM2O14862 343 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 AKAP8O43823 692 aaKnown RBP7.76□□□□□ -1.17
SYNE2-209ENST00000553308 DEAF1O75398 565 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-209ENST00000553308 BCL10O95999 233 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 HPRP00739 348 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 ALDOCP09972 364 aaKnown RBP7.76□□□□□ -1.17
SYNE2-209ENST00000553308 HLA-DOBP13765 273 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 ETFAP13804 333 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 LBPP18428 481 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 GRPRP30550 384 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 ETV4P43268 484 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 GIPRP48546 466 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 MVDP53602 400 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 CRISP3P54108 245 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 AQP5P55064 265 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 RPS23P62266 143 aaKnown RBP7.76□□□□□ -1.17
SYNE2-209ENST00000553308 CCL8P80075 99 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 GALK2Q01415 458 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 RAB39AQ14964 217 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 MFSD13AQ14CX5 517 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 GLIPR1L2Q4G1C9 344 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 ACSM5Q6NUN0 579 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 SHISA2Q6UWI4 295 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 C20orf196Q8IYI0 205 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 BPIFB2Q8N4F0 458 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 TEX29Q8N6K0 151 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 OR4M2Q8NGB6 313 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 RNF217Q8TC41 542 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 SLC38A5Q8WUX1 472 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 TAAR8Q969N4 342 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 TSPAN32Q96QS1 320 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 OR52E6Q96RD3 313 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 SPATA9Q9BWV2 254 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 NUF2Q9BZD4 464 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 C20orf27Q9GZN8 174 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF385DQ9H6B1 395 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 SLC52A3Q9NQ40 469 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 CORINQ9Y5Q5 1042 aa7.76□□□□□ -1.17
SYNE2-209ENST00000553308 IGKV1D-42A0A075B6H8 117 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 WDR91A4D1P6 747 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 PRSS23O95084 383 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 KRT75O95678 551 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 RAB36O95755 333 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 CLPTM1O96005 669 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 FSHBP01225 129 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 IGHV2-5P01817 119 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 PATE4P0C8F1 98 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 MYZAPP0CAP1 466 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 HKR1P10072 659 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ARAFP10398 606 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ANPEPP15144 967 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ABCE1P61221 599 aaKnown RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ERVS71-1P61550 626 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 RAB1AP62820 205 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ZP4Q12836 540 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 LARS2Q15031 903 aaKnown RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 NKPD1Q17RQ9 610 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 GTDC1Q4AE62 458 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 FAM69AQ5T7M9 428 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 DCAF12L2Q5VW00 463 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 C6orf89Q6UWU4 347 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 H1FNTQ75WM6 255 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF771Q7L3S4 317 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF627Q7L945 461 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF584Q8IVC4 421 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 NUDCD3Q8IVD9 361 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 UEVLDQ8IX04 471 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 NANPQ8TBE9 248 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 MGARPQ8TDB4 240 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 GTF3AQ92664 365 aaKnown RBP7.75□□□□□ -1.17
SYNE2-209ENST00000553308 RAB39BQ96DA2 213 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 TMEM19Q96HH6 336 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 TXNDC15Q96J42 360 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 DUX5Q96PT3 197 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 SORT1Q99523 831 aa7.75□□□□□ -1.17
SYNE2-209ENST00000553308 FOXB1Q99853 325 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms