RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 AHSA1O95433 338 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 CYC1P08574 325 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 PRKCAP17252 672 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 SUMO3P55854 103 aaPredicted RBP12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 RIN1Q13671 783 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 TRIM61Q5EBN2 209 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC6A19Q695T7 634 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 EGFL6Q8IUX8 553 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 IL17RDQ8NFM7 739 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 OR11A1Q9GZK7 315 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 RASD1Q9Y272 281 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 KLHDC2Q9Y2U9 406 aa12.67□□□□□ -0.38
RAB3IP-216ENST00000552199 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 LINC00854A0A1B0GVQ3 168 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 TVP23AA6NH52 213 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 FAM25AB3EWG3 89 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 FAM25CB3EWG5 89 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 FAM25GB3EWG6 89 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 B4DXG7 233 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 PSMD9O00233 223 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 PLPP3O14495 311 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 XKRYO14609 159 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 OR2T1O43869 369 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 ARL6IP5O75915 188 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 TACSTD2P09758 323 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 UCHL1P09936 223 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 ELK1P19419 428 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 RAB3BP20337 219 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 RPL27P61353 136 aaKnown RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 TRA2AQ13595 282 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 IL18Q14116 193 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 P2RY14Q15391 338 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 ACKR1Q16570 336 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 PM20D2Q8IYS1 436 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 OR6S1Q8NH40 331 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 ZNF519Q8TB69 540 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 HPS1Q92902 700 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 TXNDC15Q96J42 360 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 SNX18Q96RF0 628 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 UBL7Q96S82 380 aaPredicted RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 MNTQ99583 582 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 PDCD1LG2Q9BQ51 273 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 SYT4Q9H2B2 425 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 TXNIPQ9H3M7 391 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 GALNT9Q9HCQ5 603 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 GDF9O60383 454 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 TRIM3O75382 744 aaPredicted RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC2A2P11168 524 aaPredicted RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 AHCYP23526 432 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 APOBEC1P41238 236 aaKnown RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 DLX5P56178 289 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 ZFP36L1Q07352 338 aaKnown RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC23A3Q6PIS1 610 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 Q8N402 240 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 BMPERQ8N8U9 685 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 AGBL5Q8NDL9 886 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 KLHL15Q96M94 604 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 NPAS1Q99742 590 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 ZCCHC4Q9H5U6 513 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 WDR76Q9H967 626 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 WDR54Q9H977 334 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 CYSLTR2Q9NS75 346 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 MED11Q9P086 117 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 MYOTQ9UBF9 498 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 MRM2Q9UI43 246 aaKnown RBP12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 CPAMD8Q8IZJ3 1885 aa12.66□□□□□ -0.38
RAB3IP-216ENST00000552199 MYO15AQ9UKN7 3530 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 A0A1W2PPK0 400 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 AKR7A3O95154 331 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 OR6A2O95222 327 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 PLGP00747 810 aaPredicted RBP12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 IGHMP01871 453 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 HLA-DQB1P01920 261 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 OR8G3PP0DMU2 310 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 ZNF28P17035 718 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 FAM220AQ7Z4H9 259 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 LRRC28Q86X40 367 aaPredicted RBP12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 CHAC2Q8WUX2 184 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 PHYHIPQ92561 330 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 OR14A2Q96R54 314 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 ZNF587Q96SQ5 575 aaPredicted RBP12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 INTS14Q96SY0 518 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 GTPBP2Q9BX10 602 aaKnown RBP12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 MFRPQ9BY79 579 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 SLC22A4Q9H015 551 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 LAMP5Q9UJQ1 280 aa12.65□□□□□ -0.38
RAB3IP-216ENST00000552199 NXT1Q9UKK6 140 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms