RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 THAP1Q9NVV9 213 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TAS2R9Q9NYW1 312 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 TAS2R7Q9NYW3 318 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 AHSPQ9NZD4 102 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF69Q9UC07 566 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF225Q9UK10 706 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 UTS2RQ9UKP6 389 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 MCTS1Q9ULC4 181 aaKnown RBP3.08□□□□□ -1.92
LIMA1-206ENST00000550611 HSF4Q9ULV5 492 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 JRKLQ9Y4A0 524 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ANGPTL3Q9Y5C1 460 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF780BQ9Y6R6 833 aa3.08□□□□□ -1.92
LIMA1-206ENST00000550611 A0A087WYN8 130 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 TCRBV9S1A1TA0A576 114 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 OR5H1A6NKK0 313 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SYCE1LA8MT33 242 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 UPK1AO00322 258 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PRYO14603 147 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ABCD4O14678 606 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 RGS14O43566 566 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SHOX2O60902 331 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 LY6HO94772 140 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 UTS2O95399 124 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 TGFAP01135 160 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PDYNP01213 254 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 C2P06681 752 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 IL3P08700 152 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 GSTA2P09210 222 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 IFI6P09912 130 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 CSF3P09919 207 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 LINGO3P0C6S8 592 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PABPC4LP0CB38 370 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF23P17027 643 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 COX5AP20674 150 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 HNF1AP20823 631 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PTAFRP25105 342 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SSTR1P30872 391 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 CASQ1P31415 396 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 MPIP34949 423 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SPRP35270 261 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 KRT20P35900 424 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PAFAH1B1P43034 410 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PDLIM4P50479 330 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 FABP6P51161 128 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 GTF2A1P52655 376 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ACTG1P63261 375 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 RPP30P78346 268 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 IFT88Q13099 833 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 STX5Q13190 355 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 LARS2Q15031 903 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 RNPS1Q15287 305 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SEC23BQ15437 767 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 TRADDQ15628 312 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PLPPR5Q32ZL2 321 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ANXA2RQ3ZCQ2 193 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ARL13AQ5H913 290 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PDSS1Q5T2R2 415 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 FAM219BQ5XKK7 198 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 HBMQ6B0K9 141 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 TMEM88Q6PEY1 159 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 C3orf62Q6ZUJ4 267 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 FBXL14Q8N1E6 418 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 OR2L13Q8N349 312 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SLC43A2Q8N370 569 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 C1orf52Q8N6N3 182 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 LRRC17Q8N6Y2 441 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ZNF433Q8N7K0 673 aaPredicted RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 BANPQ8N9N5 519 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 WDR31Q8NA23 367 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PCYOX1LQ8NBM8 494 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ADPRHL1Q8NDY3 354 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 OR4F6Q8NGB9 312 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 KCTD4Q8WVF5 259 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 ST8SIA4Q92187 359 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 TAF15Q92804 592 aaKnown RBP eCLIP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 EXT2Q93063 718 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 MTBPQ96DY7 904 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 KLHL15Q96M94 604 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 RNF145Q96MT1 663 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 MUS81Q96NY9 551 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 FOXN4Q96NZ1 517 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PSD2Q9BQI7 771 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 LMF2Q9BU23 707 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 FAIM2Q9BWQ8 316 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PAIP1Q9H074 479 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 COQ10BQ9H8M1 238 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 BRF2Q9HAW0 419 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SLC35C2Q9NQQ7 365 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 PCTPQ9UKL6 214 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 MGAT4BQ9UQ53 548 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 VDAC3Q9Y277 283 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 WBP11Q9Y2W2 641 aaKnown RBP3.07□□□□□ -1.92
LIMA1-206ENST00000550611 OR10H1Q9Y4A9 318 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 SLC25A15Q9Y619 301 aa3.07□□□□□ -1.92
LIMA1-206ENST00000550611 GOLGA6L10A0A0M3HER8 536 aa3.06□□□□□ -1.92
LIMA1-206ENST00000550611 LOC390937A0A1W2PQ73 354 aa3.06□□□□□ -1.92
LIMA1-206ENST00000550611 A0A1W2PQD3 144 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms