RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 NKX2-4Q9H2Z4 354 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 ABI3Q9P2A4 366 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 NCDNQ9UBB6 729 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 NINQ8N4C6 2090 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 LOC100289279A0A1B0GTE1 492 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 LRIT2A6NDA9 550 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 TP53I11O14683 189 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 TRAPPC6AO75865 159 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 CALCBP10092 127 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 SERTAD2Q14140 314 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 CST6Q15828 149 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 OR5M10Q6IEU7 315 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 FBXW12Q6X9E4 464 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF511Q8NB15 262 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 NLGN4YQ8NFZ3 816 aaPredicted RBP14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 SENP5Q96HI0 755 aaPredicted RBP14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 SAMD10Q9BYL1 202 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 FBXL4Q9UKA2 621 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
RBFOX1-212ENST00000550418 NPPBP16860 134 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF43P17038 809 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 BDH1Q02338 343 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 DEFB110Q30KQ9 67 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 PRAMEF8Q5VWM4 474 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 PRAMEF7Q5VXH5 474 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 PLPP5Q8NEB5 264 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 LMX1AQ8TE12 382 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 TMED6Q8WW62 240 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 GPR174Q9BXC1 333 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 SLC17A9Q9BYT1 436 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 LINC00597Q9H2U6 94 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 C17orf113A0A1B0GUU1 675 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 C9J4A7 227 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 SLCO2B1O94956 709 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 CFIP05156 583 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 GABRR1P24046 479 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ARRB1P49407 418 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 IAH1Q2TAA2 248 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 RNF212Q495C1 297 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 CALHM3Q86XJ0 350 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 GKN2Q86XP6 184 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 TCEAL8Q8IYN2 117 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ATF6BQ99941 703 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 A0A1B0GWA3 101 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 HEXBP07686 556 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ITGB7P26010 798 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 OR10A3P58181 314 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 CCSMST1Q4G0I0 132 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 KIAA0907Q7Z7F0 614 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 OR2AK2Q8NG84 335 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF578Q96N58 590 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF160Q9HCG1 818 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 FGF20Q9NP95 211 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 HIDE1A8MVS5 230 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 HBE1P02100 147 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 TACR3P29371 465 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 CD80P33681 288 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 SOX18P35713 384 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 UBE2MP61081 183 aaKnown RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 RHOUQ7L0Q8 258 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 BPHLQ86WA6 291 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 KLHDC8BQ8IXV7 354 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 POC1BQ8TC44 478 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 TSACCQ96A04 125 aaPredicted RBP14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 RAB3CQ96E17 227 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 KLHDC7BQ96G42 594 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 GAREM1Q9H706 876 aa14.61□□□□□ -0.07
RBFOX1-212ENST00000550418 ARID1AO14497 2285 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 OR5H14A6NHG9 310 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 KDM4EB2RXH2 506 aaPredicted RBP14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 F5H5K5 113 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF593O00488 134 aaPredicted RBP14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 GLYATL3Q5SZD4 288 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 HTR3DQ70Z44 454 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 HSD17B11Q8NBQ5 300 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 OR51Q1Q8NH59 317 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 DDIT4LQ96D03 193 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 GPR137BO60478 399 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 RGS11O94810 467 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 ATG12O94817 140 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 OR56B1Q8NGI3 324 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 TBC1D20Q96BZ9 403 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 RAB39BQ96DA2 213 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 C20orf24Q9BUV8 137 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 WDR76Q9H967 626 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 SIRT5Q9NXA8 310 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 TAAR2Q9P1P5 351 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 LAMB1P07942 1786 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF44P15621 663 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 MGMTP16455 207 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 TAGLN2P37802 199 aaKnown RBP14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 MFGE8Q08431 387 aaPredicted RBP14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 C1orf61Q13536 156 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 ZNF620Q6ZNG0 422 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 SYT9Q86SS6 491 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 NAA40Q86UY6 237 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 TMEM151BQ8IW70 566 aa14.6□□□□□ -0.07
RBFOX1-212ENST00000550418 ZDHHC12Q96GR4 267 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms