RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TBRG1Q3YBR2 411 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 SHEQ5VZ18 495 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 ANKRD16Q6P6B7 361 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 HIST3H2AQ7L7L0 130 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 PIGWQ7Z7B1 504 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 VTCN1Q7Z7D3 282 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 TMEM255BQ8WV15 326 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 NEUROG1Q92886 237 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 HIST1H2ACQ93077 130 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 FAM162AQ96A26 154 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 PERPQ96FX8 193 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 LRRC37BQ96QE4 947 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 GPR35Q9HC97 309 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 B3GAT2Q9NPZ5 323 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 MEPEQ9NQ76 525 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 MED29Q9NX70 200 aa15.09■□□□□ 0.01
CHMP1A-208ENST00000550102 MT-ND1P03886 318 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 UGT2B15P54855 530 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 UBE2NP61088 152 aaKnown RBP15.08■□□□□ 0
CHMP1A-208ENST00000550102 RPS4XP62701 263 aaKnown RBP15.08■□□□□ 0
CHMP1A-208ENST00000550102 SPOCK1Q08629 439 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 FOXD4Q12950 439 aaPredicted RBP15.08■□□□□ 0
CHMP1A-208ENST00000550102 IFI44LQ53G44 452 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 Q5PR19 223 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 CARD17Q5XLA6 110 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 SLC22A25Q6T423 547 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 SLC46A3Q7Z3Q1 461 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 KRTAP1-3Q8IUG1 177 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 NKAIN4Q8IVV8 208 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 PFN4Q8NHR9 129 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 MAGEE2Q8TD90 523 aaPredicted RBP15.08■□□□□ 0
CHMP1A-208ENST00000550102 TMEM239Q8WW34 195 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 BCL2L2Q92843 193 aaPredicted RBP15.08■□□□□ 0
CHMP1A-208ENST00000550102 HSH2DQ96JZ2 352 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 HS6ST2Q96MM7 605 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 EMC6Q9BV81 110 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 C1QTNF6Q9BXI9 259 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 GSX2Q9BZM3 304 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 CRLF2Q9HC73 371 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 MOV10Q9HCE1 1003 aaKnown RBP15.08■□□□□ 0
CHMP1A-208ENST00000550102 FAIMQ9NVQ4 179 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 ADA2Q9NZK5 511 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 POU2F3Q9UKI9 436 aa15.08■□□□□ 0
CHMP1A-208ENST00000550102 ARPC4-TTLL3A0A0A6YYG9 625 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 SLC35F4A4IF30 521 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 ZNF726A6NNF4 738 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 RNF13O43567 381 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 SERPINA1P01009 418 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 IGF2P01344 180 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 ASAH2BP0C7U1 165 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 CD99P14209 185 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 PAX7P23759 505 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 PTH2RP49190 550 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 ARF1P84077 181 aaKnown RBP15.07■□□□□ 0
CHMP1A-208ENST00000550102 ST3GAL3Q11203 375 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 ZP4Q12836 540 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 CEACAM16Q2WEN9 425 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 NHLRC1Q6VVB1 395 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 CBLL1Q75N03 491 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 C20orf196Q8IYI0 205 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 OFCC1Q8IZS5 231 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 DEPDC4Q8N2C3 294 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 LRRC17Q8N6Y2 441 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 WFDC11Q8NEX6 87 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 SMAP2Q8WU79 429 aaPredicted RBP15.07■□□□□ 0
CHMP1A-208ENST00000550102 SGTBQ96EQ0 304 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 TXNDC15Q96J42 360 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 LRR1Q96L50 414 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 TMUB1Q9BVT8 246 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 NELFAQ9H3P2 528 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 RPS6KA6Q9UK32 745 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 A4GNTQ9UNA3 340 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 LAMP3Q9UQV4 416 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 MED31Q9Y3C7 131 aa15.07■□□□□ 0
CHMP1A-208ENST00000550102 A0A096LPE4 126 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 A0A1W2PPZ6 126 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 M0R3G1 203 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 OR7A10O76100 309 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 DANCRP0C864 163 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 IFNGR1P15260 489 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 NCK1P16333 377 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 BIDP55957 195 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 FKBP9P1Q75LS8 142 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 SLC35D2Q76EJ3 337 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 OR6N1Q8NGY5 312 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 ADAD1Q96M93 576 aaKnown RBP15.06■□□□□ 0
CHMP1A-208ENST00000550102 ULBP2Q9BZM5 246 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 ZNF701Q9NV72 531 aaPredicted RBP15.06■□□□□ 0
CHMP1A-208ENST00000550102 TAS2R5Q9NYW4 299 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 CISD1Q9NZ45 108 aaKnown RBP15.06■□□□□ 0
CHMP1A-208ENST00000550102 TAGLN3Q9UI15 199 aa15.06■□□□□ 0
CHMP1A-208ENST00000550102 SETD2Q9BYW2 2564 aaPredicted RBP15.06■□□□□ 0
CHMP1A-208ENST00000550102 ZNF99A8MXY4 864 aaPredicted RBP15.05■□□□□ -0
CHMP1A-208ENST00000550102 GMNNO75496 209 aa15.05■□□□□ -0
CHMP1A-208ENST00000550102 SOD3P08294 240 aa15.05■□□□□ -0
CHMP1A-208ENST00000550102 HOXB1P14653 301 aaPredicted RBP15.05■□□□□ -0
CHMP1A-208ENST00000550102 PAX1P15863 534 aa15.05■□□□□ -0
CHMP1A-208ENST00000550102 CSNK1A1P48729 337 aa15.05■□□□□ -0
CHMP1A-208ENST00000550102 CAMK2DQ13557 499 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms