RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PDLIM1O00151 329 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 SAGP10523 405 aaPredicted RBP17.06■□□□□ 0.32
DDX54-207ENST00000550016 DNAJA1P31689 397 aaKnown RBP17.06■□□□□ 0.32
DDX54-207ENST00000550016 MAGEA2P43356 314 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 RPL18Q07020 188 aaKnown RBP17.06■□□□□ 0.32
DDX54-207ENST00000550016 FLOT2Q14254 428 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 CCDC121Q6ZUS5 278 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 C22orf34Q6ZV56 151 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 TMPRSS11FQ6ZWK6 438 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 SLC35D2Q76EJ3 337 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 MEX3DQ86XN8 651 aaKnown RBP17.06■□□□□ 0.32
DDX54-207ENST00000550016 TMEM123Q8N131 208 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 LRMDAQ9H2I8 198 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 MMADHCQ9H3L0 296 aaPredicted RBP17.06■□□□□ 0.32
DDX54-207ENST00000550016 MCCC2Q9HCC0 563 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 MED29Q9NX70 200 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 NBPF19A0A087WUL8 3843 aa17.06■□□□□ 0.32
DDX54-207ENST00000550016 CIB4A0PJX0 185 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 SH3PXD2BA1X283 911 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 SLC35F4A4IF30 521 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 SERPINI2O75830 405 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 KRT36O76013 467 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 GOSR1O95249 250 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 THBDP07204 575 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 ITGA5P08648 1049 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 IFNGR1P15260 489 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 MPGP29372 298 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 RRM2P31350 389 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 AQP2P41181 271 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 SLC9A3P48764 834 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 FOXG1P55316 489 aaPredicted RBP17.05■□□□□ 0.32
DDX54-207ENST00000550016 LGALS3BPQ08380 585 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 LAPTM4AQ15012 233 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 SEC23BQ15437 767 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 ANKDD1AQ495B1 522 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 OAFQ86UD1 273 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 OR4K5Q8NGD3 323 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 HSD17B8Q92506 261 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 ZC3HAV1LQ96H79 300 aaKnown RBP17.05■□□□□ 0.32
DDX54-207ENST00000550016 EMC6Q9BV81 110 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 KRCC1Q9NPI7 259 aaPredicted RBP17.05■□□□□ 0.32
DDX54-207ENST00000550016 INIPQ9NRY2 104 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 SLC7A8Q9UHI5 535 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 HIF3AQ9Y2N7 669 aa17.05■□□□□ 0.32
DDX54-207ENST00000550016 HEATR1Q9H583 2144 aaKnown RBP17.05■□□□□ 0.32
DDX54-207ENST00000550016 A0A1W2PRG6 482 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 FAM221AA4D161 298 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 ZNF587BE7ETH6 402 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 EBAG9O00559 213 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 UPK3AO75631 287 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 F13BP05160 661 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 RAP2AP10114 183 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 HOXB6P17509 224 aaKnown RBP17.04■□□□□ 0.32
DDX54-207ENST00000550016 CRYGSP22914 178 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 GPR4P46093 362 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 BIDP55957 195 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 TGFBR3Q03167 851 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 OR7E24Q6IFN5 339 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 P2RY8Q86VZ1 359 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 ADGRG5Q8IZF4 528 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 GPR137CQ8N3F9 429 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 OR6X1Q8NH79 312 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 MOSPD2Q8NHP6 518 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 LRR1Q96L50 414 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 ADAD1Q96M93 576 aaKnown RBP17.04■□□□□ 0.32
DDX54-207ENST00000550016 ALPK1Q96QP1 1244 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 TMCC3Q9ULS5 477 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 ABCA12Q86UK0 2595 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 APCP25054 2843 aa17.04■□□□□ 0.32
DDX54-207ENST00000550016 DHRS12A0PJE2 317 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 CTAG2O75638 210 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 RAD51DO75771 328 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 BCL10O95999 233 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 OMPP47874 163 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 HMGA2P52926 109 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 RPS4XP62701 263 aaKnown RBP17.03■□□□□ 0.32
DDX54-207ENST00000550016 CAMK2DQ13557 499 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 GABRA6Q16445 453 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 TIMM23BQ5SRD1 257 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 CARD17Q5XLA6 110 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 LINGO2Q7L985 606 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 SPATA24Q86W54 205 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 C20orf196Q8IYI0 205 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 C1orf162Q8NEQ5 155 aaPredicted RBP17.03■□□□□ 0.32
DDX54-207ENST00000550016 OR13C2Q8NGS9 318 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 OR51A7Q8NH64 312 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 CANT1Q8WVQ1 401 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 FAM46AQ96IP4 442 aaKnown RBP17.03■□□□□ 0.32
DDX54-207ENST00000550016 MUS81Q96NY9 551 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 TNFRSF13CQ96RJ3 184 aa17.03■□□□□ 0.32
DDX54-207ENST00000550016 TRAV27A0A087WT01 109 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 TCRBV3S1A0A5B6 114 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 OR5H1A6NKK0 313 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 RPL36A-HNRNPH2H7BZ11 118 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 CDC42EP2O14613 210 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 CLOCKO15516 846 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 ROR2Q01974 943 aaKnown RBP17.02■□□□□ 0.32
DDX54-207ENST00000550016 FHL1Q13642 323 aa17.02■□□□□ 0.32
DDX54-207ENST00000550016 TAB1Q15750 504 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms