RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 FBXL3Q9UKT7 428 aa11.71□□□□□ -0.53
TROAP-211ENST00000549891 CORINQ9Y5Q5 1042 aa11.71□□□□□ -0.53
TROAP-211ENST00000549891 TRAV36DV7A0A075B6V5 113 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 ZNF503-AS2A6NEH8 195 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 M0R3G1 203 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 CD79AP11912 226 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 ETS2P15036 469 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
TROAP-211ENST00000549891 GRPRP30550 384 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 GLRXP35754 106 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 GPR6P46095 362 aaPredicted RBP11.7□□□□□ -0.54
TROAP-211ENST00000549891 HOXC5Q00444 222 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 GALK2Q01415 458 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 RGNQ15493 299 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 ALG10BQ5I7T1 473 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 GKAP1Q5VSY0 366 aaPredicted RBP11.7□□□□□ -0.54
TROAP-211ENST00000549891 DEF8Q6ZN54 512 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 MGARPQ8TDB4 240 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 EPYCQ99645 322 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 ASPNQ9BXN1 380 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 MRPL37Q9BZE1 423 aaKnown RBP11.7□□□□□ -0.54
TROAP-211ENST00000549891 A4GALTQ9NPC4 353 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 B3GNT2Q9NY97 397 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 SELENONQ9NZV5 590 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 GRIP1Q9Y3R0 1128 aa11.7□□□□□ -0.54
TROAP-211ENST00000549891 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 TRAF3IP2O43734 574 aaPredicted RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 SEC14L2O76054 403 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 RAB36O95755 333 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 HLA-HP01893 362 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 TFP02787 698 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 IGFBP1P08833 259 aaPredicted RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 SAGP10523 405 aaPredicted RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 KITP10721 976 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 ACHEP22303 614 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 PRKAR1BP31321 381 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 LSP1P33241 339 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 POLR2JP52435 117 aaKnown RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 NCALDP61601 193 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 RUNX1T1Q06455 604 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 FAM91A1Q658Y4 838 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 ULK3Q6PHR2 472 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 SHQ1Q6PI26 577 aaKnown RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 ZNF627Q7L945 461 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 C20orf196Q8IYI0 205 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 SCAIQ8N9R8 606 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 OR6S1Q8NH40 331 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 RDH5Q92781 318 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 VPS33AQ96AX1 596 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 TMEM186Q96B77 213 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 SLC47A1Q96FL8 570 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 SPATA5L1Q9BVQ7 753 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 METTL17Q9H7H0 456 aaPredicted RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 SDR39U1Q9NRG7 319 aaPredicted RBP11.69□□□□□ -0.54
TROAP-211ENST00000549891 POFUT2Q9Y2G5 429 aa11.69□□□□□ -0.54
TROAP-211ENST00000549891 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ZNF726A6NNF4 738 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 CLIC1O00299 241 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ENTPD5O75356 428 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 UBL3O95164 117 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 MSMBP08118 114 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 BMP2P12643 396 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ZNF35P13682 527 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ZNF14P17017 642 aaPredicted RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 CBLP22681 906 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 PTDSS1P48651 473 aaKnown RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 TMEM33P57088 247 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 MRPS11P82912 194 aaKnown RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 PIGFQ07326 219 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 MPP2Q14168 576 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 GTDC1Q4AE62 458 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ELFN2Q5R3F8 820 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 PHYHD1Q5SRE7 291 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 CEP85LQ5SZL2 805 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 KRT73Q86Y46 540 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 GOLGA6L1Q8N7Z2 621 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 OR6N1Q8NGY5 312 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 CLDND2Q8NHS1 167 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 RNF217Q8TC41 542 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ZNF418Q8TF45 676 aaPredicted RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 MAL2Q969L2 176 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 SLC41A3Q96GZ6 507 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 MAELQ96JY0 434 aaKnown RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 ULBP2Q9BZM5 246 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 HIF1ANQ9NWT6 349 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 KLHL14Q9P2G3 628 aa11.68□□□□□ -0.54
TROAP-211ENST00000549891 TESQ9UGI8 421 aaKnown RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 ZNF346Q9UL40 294 aaKnown RBP11.68□□□□□ -0.54
TROAP-211ENST00000549891 IGKV1D-42A0A075B6H8 117 aa11.67□□□□□ -0.54
TROAP-211ENST00000549891 A0A087WUJ7 227 aa11.67□□□□□ -0.54
TROAP-211ENST00000549891 MS4A18H0YCH9 400 aa11.67□□□□□ -0.54
TROAP-211ENST00000549891 UBDO15205 165 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms