RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 NPIPA2E9PIF3 369 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 NPIPA3F8WFD2 350 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 HIST1H1CP16403 213 aaKnown RBP15.53■□□□□ 0.08
LETMD1-220ENST00000549686 ACVR2AP27037 513 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 PTGER4P35408 488 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 CHN2P52757 468 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.53■□□□□ 0.08
LETMD1-220ENST00000549686 SLC17A1Q14916 467 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 RNPS1Q15287 305 aaKnown RBP15.53■□□□□ 0.08
LETMD1-220ENST00000549686 RBM48Q5RL73 367 aaKnown RBP15.53■□□□□ 0.08
LETMD1-220ENST00000549686 C6orf141Q5SZD1 244 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 SLC35F1Q5T1Q4 408 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 UGT2A3Q6UWM9 527 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 GPAT4Q86UL3 456 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 GID4Q8IVV7 300 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 OR9K2Q8NGE7 335 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 OR52E2Q8NGJ4 325 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 ZNF519Q8TB69 540 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 RFKQ969G6 155 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 ZNF566Q969W8 418 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 Q96M85 177 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 UCN2Q96RP3 112 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 IL4I1Q96RQ9 567 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 PRRG4Q9BZD6 226 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 RNF122Q9H9V4 155 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 GP6Q9HCN6 339 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 KLHL9Q9P2J3 617 aa15.53■□□□□ 0.08
LETMD1-220ENST00000549686 LAMA5O15230 3695 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 MPDZO75970 2070 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 KDM4EB2RXH2 506 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ZNF814B7Z6K7 855 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 PRR23D1E9PI22 279 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 GPR171O14626 319 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 TRAF3IP2O43734 574 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 SERPINI2O75830 405 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 PLGP00747 810 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 RENP00797 406 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 CCDC159P0C7I6 412 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 PRR23D2P0DMB1 279 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 NR2C1P13056 603 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 IFNGR1P15260 489 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ACVR1BP36896 505 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ITGADQ13349 1161 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 TMED1Q13445 227 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ZNF362Q5T0B9 420 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ARMC4Q5T2S8 1044 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 NXNL2Q5VZ03 156 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 NHLRC1Q6VVB1 395 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 CXXC5Q7LFL8 322 aaKnown RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 CCDC103Q8IW40 242 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 KDM8Q8N371 416 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 CISD2Q8N5K1 135 aaKnown RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 SLC37A3Q8NCC5 494 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 OR4K13Q8NH42 304 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 OR6X1Q8NH79 312 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 FNDC8Q8TC99 324 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 RNF128Q8TEB7 428 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 APH1BQ8WW43 257 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ASB10Q8WXI3 467 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 UBE2FQ969M7 185 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 ZNF845Q96IR2 970 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 LRR1Q96L50 414 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 SLX1AQ9BQ83 275 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 SCN3BQ9NY72 215 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 EMC3Q9P0I2 261 aa15.52■□□□□ 0.08
LETMD1-220ENST00000549686 H2AFY2Q9P0M6 372 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.52■□□□□ 0.08
LETMD1-220ENST00000549686 MGAQ8IWI9 3026 aa15.52■□□□□ 0.07
LETMD1-220ENST00000549686 IGKV3D-15A0A087WSY6 115 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 IGHV3-15A0A0B4J1V0 119 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 PRODHO43272 600 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 WBP4O75554 376 aaKnown RBP15.51■□□□□ 0.07
LETMD1-220ENST00000549686 TNFAIP8O95379 198 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 HOXD4P09016 255 aaPredicted RBP15.51■□□□□ 0.07
LETMD1-220ENST00000549686 HLA-DOBP13765 273 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 GABRA1P14867 456 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 PTGS2P35354 604 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 SLC25A1P53007 311 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 LGALS3BPQ08380 585 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 RASGEF1BQ0VAM2 473 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 CRMP1Q14194 572 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 PON3Q15166 354 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 MESTQ5EB52 335 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 CREB3L2Q70SY1 520 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 ZNF786Q8N393 782 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 NPEPL1Q8NDH3 523 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 CNIH3Q8TBE1 160 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 RASD2Q96D21 266 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 TUBA1CQ9BQE3 449 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 ALG12Q9BV10 488 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 PLCXD1Q9NUJ7 323 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 RCE1Q9Y256 329 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 MYRFQ9Y2G1 1151 aa15.51■□□□□ 0.07
LETMD1-220ENST00000549686 PRSS37A4D1T9 235 aa15.5■□□□□ 0.07
LETMD1-220ENST00000549686 SLC22A20A6NK97 555 aa15.5■□□□□ 0.07
LETMD1-220ENST00000549686 ZNF726A6NNF4 738 aa15.5■□□□□ 0.07
LETMD1-220ENST00000549686 ZNF716A6NP11 495 aa15.5■□□□□ 0.07
LETMD1-220ENST00000549686 CLCA1A8K7I4 914 aa15.5■□□□□ 0.07
LETMD1-220ENST00000549686 ZNF724A8MTY0 619 aa15.5■□□□□ 0.07
LETMD1-220ENST00000549686 M0R129 80 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms