RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FAM184AQ8NB25 1140 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 STEAP2Q8NFT2 490 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 OR52M1Q8NGK5 317 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 TRUB1Q8WWH5 349 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 EMG1Q92979 244 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 FAF2Q96CS3 445 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 CELF6Q96J87 481 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 C12orf66Q96MD2 445 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MTMR9Q96QG7 549 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 OR5B2Q96R09 309 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF607Q96SK3 696 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 KIR2DL4Q99706 377 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ZSCAN5AQ9BUG6 496 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 CXCL16Q9H2A7 254 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 GLIPR2Q9H4G4 154 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF702PQ9H963 129 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 CAB39LQ9H9S4 337 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 B3GNT2Q9NY97 397 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 SIGLEC8Q9NYZ4 499 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MMP17Q9ULZ9 603 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 NPIPA1Q9UND3 350 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 RASD1Q9Y272 281 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MRPS33Q9Y291 106 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 CA5BQ9Y2D0 317 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 WDR45Q9Y484 360 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 NOTCH3Q9UM47 2321 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 TET1Q8NFU7 2136 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 WDFY4Q6ZS81 3184 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 PTPRSQ13332 1948 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MCM3APO60318 1980 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 MYO15AQ9UKN7 3530 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF705EA8MWA4 302 aaPredicted RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 H3BMQ9 156 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 UBXN8O00124 270 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 MAGEB3O15480 346 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 RRP8O43159 456 aaKnown RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 KLF8O95600 359 aaPredicted RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 CA1P00915 261 aaPredicted RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ATF6P18850 670 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 HNF1AP20823 631 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 BCKDHBP21953 392 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 U2AF2P26368 475 aaKnown RBP eCLIP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 HPCAL1P37235 193 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 P2RY2P41231 377 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 RPL29P47914 159 aaKnown RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 CBX1P83916 185 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 SPIBQ01892 262 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF33AQ06730 810 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 CHIT1Q13231 466 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 TPD52L1Q16890 204 aaPredicted RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 OR2B11Q5JQS5 317 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ATAD3BQ5T9A4 648 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 TTC23Q5W5X9 447 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 FAM199XQ6PEV8 388 aaPredicted RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 TMEM86AQ8N2M4 240 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ALLCQ8N6M5 410 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 CD177Q8N6Q3 437 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 SYT14Q8NB59 555 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 OR10A7Q8NGE5 316 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 SETD7Q8WTS6 366 aaKnown RBP2.98□□□□□ -1.93
PTCH1-216ENST00000548379 C8orf76Q96K31 380 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 CNDP1Q96KN2 507 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 C7orf34Q96L11 122 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 AMDHD1Q96NU7 426 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 MCHR1Q99705 422 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ACBD6Q9BR61 282 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ASB7Q9H672 318 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 FANCFQ9NPI8 374 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 TNFRSF19Q9NS68 423 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 PRR34Q9NV39 138 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 AIPL1Q9NZN9 384 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 COX16Q9P0S2 106 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 MOKQ9UQ07 419 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 SCML2Q9UQR0 700 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 CCL26Q9Y258 94 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 PLXNA3P51805 1871 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF318Q5VUA4 2279 aa2.98□□□□□ -1.93
PTCH1-216ENST00000548379 C5orf42Q9H799 3197 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 IGHV2-70DA0A0C4DH43 119 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ERI2A8K979 691 aaKnown RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 K7EQS6 105 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PIRO00625 290 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 TAPBPO15533 448 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 GMFGO60234 142 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 KIAA0754O94854 1291 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 IGHV3-23P01764 117 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 IGHG4P01861 327 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 HLA-EP13747 358 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 HMGA1P17096 107 aaKnown RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 TNFSF9P41273 254 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 KIR2DS2P43631 304 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 SULT1E1P49888 294 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 TFAMQ00059 246 aaKnown RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 OC90Q02509 493 aaPredicted RBP2.97□□□□□ -1.93
PTCH1-216ENST00000548379 KDSRQ06136 332 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 KIAA0040Q15053 153 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ZBTB6Q15916 424 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF77Q15935 545 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 CFAP221Q4G0U5 840 aa2.97□□□□□ -1.93
PTCH1-216ENST00000548379 PRR30Q53SZ7 412 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms