RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TMEM204Q9BSN7 226 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 CCM2LQ9NUG4 571 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 NPAP1Q9NZP6 1156 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 ENPP4Q9Y6X5 453 aa16.44■□□□□ 0.22
PRPF40B-206ENST00000547764 OTOGQ6ZRI0 2925 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 SLC35F4A4IF30 521 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 DPRXA6NFQ7 191 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 BLOC1S5-TXNDC5H3BN57 136 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 RNF13O43567 381 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 IFNGR1P15260 489 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 DNASE1P24855 282 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 ROR2Q01974 943 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 CARD17Q5XLA6 110 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 HMBOX1Q6NT76 420 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 NANOGNBQ7Z5D8 188 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 CYP4Z1Q86W10 505 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 GPR137CQ8N3F9 429 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 C17orf78Q8N4C9 275 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 PIK3C3Q8NEB9 887 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 ANKK1Q8NFD2 765 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 LIPHQ8WWY8 451 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 C7orf34Q96L11 122 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 NSMCE2Q96MF7 247 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 ESRP2Q9H6T0 727 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 UBTD1Q9HAC8 227 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 SLC17A5Q9NRA2 495 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 NDUFAF4Q9P032 175 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 V9GYQ6 96 aa16.43■□□□□ 0.22
PRPF40B-206ENST00000547764 ZNF726A6NNF4 738 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 RPL36A-HNRNPH2H7BZ11 118 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 ATE1O95260 518 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 RAF1P04049 648 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 BSPH1Q075Z2 132 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 KEAP1Q14145 624 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 HIKESHIQ53FT3 197 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 PHYHD1Q5SRE7 291 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 SLC35D2Q76EJ3 337 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 TRPM8Q7Z2W7 1104 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 C20orf196Q8IYI0 205 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 OR1K1Q8NGR3 316 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 PYURFQ96I23 114 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 BOD1Q96IK1 185 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 NMNAT1Q9HAN9 279 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 GPR35Q9HC97 309 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 CADP27708 2225 aa16.42■□□□□ 0.22
PRPF40B-206ENST00000547764 HTR3EA5X5Y0 456 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 hCG_2039718K7EN88 272 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 M0R3G1 203 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 SEMG1P04279 462 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 CD3EP07766 207 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 IFI30P13284 250 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 RHCEP18577 417 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 BIDP55957 195 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 VLDLRP98155 873 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 RPL18Q07020 188 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 CAMK2DQ13557 499 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 ACKR1Q16570 336 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 TBPL2Q6SJ96 375 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 NRMQ8IXM6 262 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 ACOT11Q8WXI4 607 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 BCL2L2Q92843 193 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 BPIFA2Q96DR5 249 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 ZNF837Q96EG3 531 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 LRR1Q96L50 414 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 C1QTNF6Q9BXI9 259 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 CRLF2Q9HC73 371 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 AMDHD2Q9Y303 409 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 FAM32AQ9Y421 112 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 RNF115Q9Y4L5 304 aa16.41■□□□□ 0.22
PRPF40B-206ENST00000547764 A0A087WUU8 490 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 CLOCKO15516 846 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 DIRAS1O95057 198 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 F13BP05160 661 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 TSPAN19P0C672 248 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 CD53P19397 219 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 MAKP20794 623 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 HOXC12P31275 282 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 AQP2P41181 271 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 ZNF83P51522 516 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 SH3BGRP55822 239 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 PRPS1P60891 318 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 ARF1P84077 181 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 PRKCDQ05655 676 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 TESK1Q15569 626 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 CEACAM16Q2WEN9 425 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 TBRG1Q3YBR2 411 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 IQCCQ4KMZ1 466 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 ZNF730Q6ZMV8 503 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 MEX3DQ86XN8 651 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 RNF113BQ8IZP6 322 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 ARHGAP24Q8N264 748 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 OR6N1Q8NGY5 312 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 OR6X1Q8NH79 312 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 LILRB1Q8NHL6 650 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 MOSPD2Q8NHP6 518 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 ADAD1Q96M93 576 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 ANKRD19PQ9H560 264 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 TAS2R1Q9NYW7 299 aa16.4■□□□□ 0.22
PRPF40B-206ENST00000547764 A0A096LPE4 126 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 A0A1W2PPZ6 126 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms