RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZNF587Q96SQ5 575 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-215ENST00000547672 CHCHD6Q9BRQ6 235 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 OR11A1Q9GZK7 315 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 KCNN2Q9H2S1 579 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 CCDC59Q9P031 241 aaKnown RBP12.12□□□□□ -0.47
PTCH1-215ENST00000547672 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
PTCH1-215ENST00000547672 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 A0A1W2PNV4 684 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 PRSS37A4D1T9 235 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 C11orf98E9PRG8 122 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 SERPINA3P01011 423 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 CD1AP06126 327 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 LIPCP11150 499 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 ITGA3P26006 1051 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 FGF9P31371 208 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 CLDN6P56747 220 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 SOX8P57073 446 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 OR2B6P58173 313 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 RAC1P63000 192 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 Q0VFX4 171 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 MYBPHQ13203 477 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 ACKR1Q16570 336 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 PDSS1Q5T2R2 415 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 EEF1A1P5Q5VTE0 462 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 C1QL3Q5VWW1 255 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 LIPKQ5VXJ0 399 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 TMEM225Q6GV28 225 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 PAMR1Q6UXH9 720 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 TMPRSS7Q7RTY8 843 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 DTX1Q86Y01 620 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 SIRT6Q8N6T7 355 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 ATP6V1C2Q8NEY4 427 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 OR6K6Q8NGW6 343 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF524Q96C55 264 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 FAM122AQ96E09 287 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 KLHL15Q96M94 604 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 KCTD7Q96MP8 289 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 TSPAN32Q96QS1 320 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 RBP7Q96R05 134 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 HCAR1Q9BXC0 346 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 PLGRKTQ9HBL7 147 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 HMG20AQ9NP66 347 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 VSX1Q9NZR4 365 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 CRNNQ9UBG3 495 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-215ENST00000547672 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 RASD1Q9Y272 281 aa12.11□□□□□ -0.47
PTCH1-215ENST00000547672 WDR87Q6ZQQ6 2873 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 KNTC1P50748 2209 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 TRDV1A0A1B0GX56 115 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 SULT2B1O00204 365 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 APOL3O95236 402 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 RORCP51449 518 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 HSF1Q00613 529 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 RUNX1T1Q06455 604 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 SSX1Q16384 188 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 OR2G6Q5TZ20 316 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 TMPPEQ6ZT21 453 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 SHFQ7M4L6 423 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 ZBTB46Q86UZ6 589 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 UEVLDQ8IX04 471 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 BEST3Q8N1M1 668 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF519Q8TB69 540 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 ASB17Q8WXJ9 295 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 PSMF1Q92530 271 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 MIB2Q96AX9 1013 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 ZMYND19Q96E35 227 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-215ENST00000547672 ADAD1Q96M93 576 aaKnown RBP12.1□□□□□ -0.47
PTCH1-215ENST00000547672 JSRP1Q96MG2 331 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-215ENST00000547672 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 OXGR1Q96P68 337 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 OR5B2Q96R09 309 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 KLHDC3Q9BQ90 382 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 MED18Q9BUE0 208 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 OR51E2Q9H255 320 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 SRA1Q9HD15 236 aaKnown RBP12.1□□□□□ -0.47
PTCH1-215ENST00000547672 TIGARQ9NQ88 270 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 LRFN1Q9P244 771 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
PTCH1-215ENST00000547672 SDK2Q58EX2 2172 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 H3BML4 177 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 J3QLW9 94 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 PLPP2O43688 288 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 TMCC2O75069 709 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 SERPINI2O75830 405 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 SULT1C4O75897 302 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 IL1AP01583 271 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms