RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 EFCAB7A8K855 629 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 C1orf196B1AJZ1 125 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 CKMP06732 381 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 FOLR2P14207 255 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 PTAFRP25105 342 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 DUSP2Q05923 314 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 HYAL1Q12794 435 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 PLEKHN1Q494U1 663 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ZNF658BQ4V348 819 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 FAM46CQ5VWP2 391 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 UNQ6126/PRO20091Q6UXV3 157 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ZNF813Q6ZN06 617 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 GAREM2Q75VX8 874 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 MISPQ8IVT2 679 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 DND1Q8IYX4 353 aaKnown RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SDR9C7Q8NEX9 313 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 OR51L1Q8NGJ5 315 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 OR8S1Q8NH09 359 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 CXorf40AQ8TE69 158 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 RAD51AP1Q96B01 352 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 MOAP1Q96BY2 351 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 PRAP1Q96NZ9 151 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ALX4Q9H161 411 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 TCF7L1Q9HCS4 588 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 PRMT8Q9NR22 394 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ADAM29Q9UKF5 820 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SIGLEC7Q9Y286 467 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ASF1AQ9Y294 204 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SLC22A7Q9Y694 548 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 MTCH2Q9Y6C9 303 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 CHD7Q9P2D1 2997 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 COL4A3Q01955 1670 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 MDC1Q14676 2089 aaKnown RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 A0A0A6YYD5 115 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 COLCA2A8K830 154 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SOX1O00570 391 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 EMC8O43402 210 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 XRCC3O43542 346 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 OR1F1O43749 312 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 POU2F2P09086 479 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SLC25A4P12235 298 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 MC3RP41968 323 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 TRA2BP62995 288 aaKnown RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ZNF234Q14588 700 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 YOD1Q5VVQ6 348 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 LIN54Q6MZP7 749 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 TMEM184AQ6ZMB5 413 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 RANBP3LQ86VV4 465 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 JAZF1Q86VZ6 243 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SLC35F2Q8IXU6 374 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 RNF113BQ8IZP6 322 aaKnown RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 DVL3Q92997 716 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 BPIFA2Q96DR5 249 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 CNRIP1Q96F85 164 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 CNN2Q99439 309 aaKnown RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 NRTNQ99748 197 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SLITRK2Q9H156 845 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 SEBOXQ9HB31 216 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 UQCC1Q9NVA1 299 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 WSB2Q9NYS7 404 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-205ENST00000547068 GHRLQ9UBU3 117 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ZNF281Q9Y2X9 895 aa9.79□□□□□ -0.84
NPAS3-205ENST00000547068 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 ZNF705EA8MWA4 302 aaPredicted RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 WRBO00258 174 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 FGF16O43320 207 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 POP7O75817 140 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 CD3DP04234 171 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 ANXA2P07355 339 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 RHOP08100 348 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 PSMD4P55036 377 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 LTBQ06643 244 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 TXNDC8Q6A555 127 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 MRM1Q6IN84 353 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 ENPP7Q6UWV6 458 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 STAC2Q6ZMT1 411 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 ZNF836Q6ZNA1 936 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 C12orf76Q8N812 135 aaPredicted RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 OR5M8Q8NGP6 311 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 ADAMTS15Q8TE58 950 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 PAPOLGQ9BWT3 736 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 C1orf198Q9H425 327 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 RNF122Q9H9V4 155 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 PELI2Q9HAT8 420 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 MRPS30Q9NP92 439 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 HCFC1R1Q9NWW0 138 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 C2orf42Q9NWW7 574 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 UPB1Q9UBR1 384 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 SLC25A13Q9UJS0 675 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 PLEKHA6Q9Y2H5 1048 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 A0A1W2PRU2 124 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 A0A1W2PS29 197 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 OR2T1O43869 369 aa9.78□□□□□ -0.84
NPAS3-205ENST00000547068 FARS2O95363 451 aaKnown RBP9.78□□□□□ -0.84
NPAS3-205ENST00000547068 IFNGP01579 166 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms